DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and Spn28Db

DIOPT Version :10

Sequence 1:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster


Alignment Length:370 Identity:111/370 - (30%)
Similarity:190/370 - (51%) Gaps:28/370 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSEVAKQHAES 82
            |..||...:.|:... |.:.||......::::.|||.|.:|:||||.|.|.| :.:|:||::...
  Fly    23 FKLNLLELVMDKAES-NFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPV-DVTEMAKKYERI 85

  Fly    83 WTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSVKKVNKWLEK 147
            .::    .:|...||....|||||..::|.|:|.:....|.||  ..:.|:...:...::..:.:
  Fly    86 MSN----FQKHNGLRFTNWLYVNETYEVRQDYNTLMKSTFMAE--GKDPLSQRKASNSISFSIHR 144

  Fly   148 HTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRMEVSMMRQIGQ 212
            .:...:|.:........:.|.:|||::::...|...|.::.|::..|..:..:::.|.||..:|:
  Fly   145 KSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMMSHVGR 209

  Fly   213 FR-----YGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDMNEVAAKSLMK-E 271
            ||     ||       ||:::||:.|:|:|:|.||.....|..:|:.|..|      ::||:: .
  Fly   210 FRIADHSYG-------QIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRTL------SESLVENN 261

  Fly   272 VDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARHKVFLNVTEFGCE 336
            |.|.:|||:|:...:|...|:|:||:.:| :..:|||.|....|..||:...||.|:.:.|.|..
  Fly   262 VHVELPKFKIKYQTELVESLKKLGIHLIF-SNTSDLSGLLTNGTGAKINHVVHKSFIEINERGAS 325

  Fly   337 VAPEAEVQPEVLKKNPDRKFFKADRPFVFAIRDRKNVYFVGHFVK 381
            ....::....:.||......||.:|||||.|||:..|||.|..|:
  Fly   326 TGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHTVYFRGRVVR 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 111/370 (30%)
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 110/368 (30%)

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