DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn47C and Serpinc1

DIOPT Version :10

Sequence 1:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:401 Identity:109/401 - (27%)
Similarity:185/401 - (46%) Gaps:51/401 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LSASPIVFARNLFRAL------NDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGV 69
            ||.:...||.|.::.|      ||     |:.:||....:|..:..:||...:..:|..  :...
  Rat    84 LSKANSRFATNFYQHLADSKNDND-----NIFLSPLSISTAFAMTKLGACNNTLKQLME--VFKF 141

  Fly    70 SNKSEVAKQHAESWTDECSC-----AKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSL 129
            ...||........:..:.:|     |.|...|....||:.::.......:.|::...:.|:...|
  Rat   142 DTISEKTSDQIHFFFAKLNCRLYRKANKSSNLVSANRLFGDKSLTFNESYQDVSEIVYGAKLQPL 206

  Fly   130 NYL-NPEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDD 193
            ::. |||.|...:|.|:...|...::::......:..::::|||:::|:..|...|..:.|:.:.
  Rat   207 DFKENPEQSRVTINNWVANKTEGRIKDVIPQGAIDELTALVLVNTIYFKGLWKSKFSPENTRKEP 271

  Fly   194 FWINPRQRMEVSMMRQIGQFRY---GESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKL 255
            |.....|...|.||.|.|:|:|   ||.    :|:|::||:..::||::|||.....|.::|::|
  Rat   272 FHKVDGQSCLVPMMYQEGKFKYRRVGEG----TQVLEMPFKGDDITMVLILPKPEKSLAKVEQEL 332

  Fly   256 G----QLDMNEVAAKSLMKEVDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADL--------S 308
            .    |..::|::...|:    |.:|:||||.:..||..||.||:..:|...::.|        .
  Rat   333 TPELLQEWLDELSEVMLV----VHVPRFRIEDSFSLKEQLQDMGLVDLFSPEKSQLPGIIAEGRD 393

  Fly   309 DLFEMKTPQKISEARHKVFLNVTEFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVFAIRD--RK 371
            |||       :|:|.||.||.|.|.|.|.|....|.......||.|..|||:|||:..||:  ..
  Rat   394 DLF-------VSDAFHKAFLEVNEEGSEAAASTSVVITGRSLNPSRVTFKANRPFLVLIREVALN 451

  Fly   372 NVYFVGHFVKP 382
            .:.|:|....|
  Rat   452 TIIFMGRVSNP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 106/397 (27%)
Serpinc1NP_001012027.1 serpinC1_AT3 71..464 CDD:381002 109/401 (27%)

Return to query results.
Submit another query.