DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and Serpinb6a

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_006253933.1 Gene:Serpinb6a / 291085 RGDID:735108 Length:400 Species:Rattus norvegicus


Alignment Length:398 Identity:115/398 - (28%)
Similarity:194/398 - (48%) Gaps:29/398 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SGG---TTAPSLSASPIVFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSK 64
            |||   |....|.....:||..|.:.|::: ...|:.:||....:|:|:|||||.|.:|.::...
  Rat    14 SGGYRFTIMDHLQEGNGIFALKLLKTLSED-SSNNIFLSPISISAALTMVFMGAKGMTASQMVQT 77

  Fly    65 LILG--VSNKSEVAKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAY 127
            |.|.  ..|......|..:|...|.:.......|:...||:..:...|...|.|...:|:.||..
  Rat    78 LSLDKCSGNGGGDVHQGFQSLLAEVNKTGTQYLLKTANRLFGEKTCDILASFKDACRKFYEAEME 142

  Fly   128 SLNYL-NPEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQI 191
            .|::. :.|.|.:::|.|:.|.|...::.|..|.:.:.|:.::|||:::|:..|:|.|.::.|:.
  Rat   143 ELDFKGDTEQSRQRINTWVAKKTEDKIKELLAPGIVDPDTVLVLVNAIYFKGNWDKQFNKEHTRE 207

  Fly   192 DDFWINPRQRMEVSMMRQIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKL- 255
            ..|.::..:...|.||.....|:.....::.::||.||:..:.|.|:|:||.....|..:|::| 
  Rat   208 KPFKVSKTEEKPVQMMFMKSTFKMTYIGEIFTKILLLPYAGNELNMIIMLPDEHIELKTVEKELT 272

  Fly   256 -------GQLDMNEVAAKSLMKEVDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEM 313
                   .:|||.:      .:||:|.:|:|::|...|:||.|.|:|:...|..|:||.|.: ..
  Rat   273 YEKFIEWTRLDMLD------EEEVEVFLPRFKLEENYDMKVVLGKLGMTDAFMEGRADFSGI-AS 330

  Fly   314 KTPQKISEARHKVFLNVTEFGCE--VAPEAEVQPEVLKKNPDRKFFKADRPFVFAIR--DRKNVY 374
            |....:|:..||.|:.|.|.|.|  .|..:.:....|:..|.   |.||.||:|.|:  ..|.:.
  Rat   331 KQGLFLSKVIHKAFVEVNEEGTEAVAATGSTITMRCLRFTPR---FLADHPFLFFIQHVKTKGIL 392

  Fly   375 FVGHFVKP 382
            |.|.|..|
  Rat   393 FCGRFSSP 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 108/375 (29%)
Serpinb6aXP_006253933.1 SERPIN 25..400 CDD:294093 110/385 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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