DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and HMSD

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_016881199.1 Gene:HMSD / 284293 HGNCID:23037 Length:217 Species:Homo sapiens


Alignment Length:108 Identity:27/108 - (25%)
Similarity:46/108 - (42%) Gaps:2/108 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SAMTLVFMGAGGKSADELRSKLILG-VSNKSEVAKQHAESWTDECSCAKKGVALRLVTRLYVNEE 107
            ||:.:|||||.|.:|.::...|... :..:.....:..:|.....:.......||....|:..:.
Human     5 SALAMVFMGAKGNTAAQMSQALCFSKIGGEDGDIHRGFQSLLVAINRTDTEYVLRTANGLFGEKS 69

  Fly   108 EKIRTDFNDMALEFFNAEAYSLNYLN-PEDSVKKVNKWLEKHT 149
            ....|.|.|...:|:.|....|:::| .|.|..:||.|:...|
Human    70 YDFLTGFTDSCGKFYQATIKQLDFVNDTEKSTTRVNSWVADKT 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 27/108 (25%)
HMSDXP_016881199.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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