DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and Serpina3f

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001028507.2 Gene:Serpina3f / 238393 MGIID:2182838 Length:445 Species:Mus musculus


Alignment Length:385 Identity:95/385 - (24%)
Similarity:173/385 - (44%) Gaps:52/385 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLSASPIVFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSE 74
            :|::|...||.:|::.|..:.|..|::.||....:|:.|:.:||...:..|:...|...::...|
Mouse    36 TLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLTETPE 100

  Fly    75 V-AKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSV 138
            . ..|......|..|.....|.:...:.|::.:..:|..:|.:.|...:.|||::.::..|.::.
Mouse   101 PDIHQGFRYLLDLLSQPGNQVQISTGSALFIEKHLQILAEFKEKARALYQAEAFTADFQQPLEAT 165

  Fly   139 KKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRME 203
            |.:|.::..||...::.|.:.  .:..:.::|||.::|:.||...|....|...:|:::..:.::
Mouse   166 KLINDYVSNHTQGKIKELISD--LDKRTLMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVK 228

  Fly   204 VSMMRQIGQFR--YGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDMNEVAAK 266
            |.||: |....  |...::|...:::|.: ..|.:.|.|||             .|..|.:|.| 
Mouse   229 VPMMK-INNLTTPYFRDEELSCTVVELKY-TGNASAMFILP-------------DQGKMQQVEA- 277

  Fly   267 SLMKEV--------------DVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLF---EMK 314
            ||..|.              ::.:|||.|.....|:..|.::||..:|.. |||||.:.   :::
Mouse   278 SLQPETLRNWKDSLKPRLINELCLPKFSISTDYSLEHILPELGIRELFST-QADLSAITGTKDLR 341

  Fly   315 TPQKISEARHKVFLNVTEFGCEVAPEAEVQ-----PEVLKKNPDRKFFKADRPFVFAIRD 369
            |.|.:    ||..|:|.|.|.|.|.....|     ..|:...  :.:|  ||||:..|.|
Mouse   342 TSQVV----HKAVLDVAETGTEAAAGTGYQNLQCCQGVIYSM--KIYF--DRPFLMIISD 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 93/377 (25%)
Serpina3fNP_001028507.2 alpha-1-antitrypsin_like 40..405 CDD:239011 94/381 (25%)
RCL 357..382 5/26 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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