DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn47C and Serpina3k

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_035588.2 Gene:Serpina3k / 20714 MGIID:98377 Length:418 Species:Mus musculus


Alignment Length:399 Identity:95/399 - (23%)
Similarity:182/399 - (45%) Gaps:42/399 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GTTAPSLSASPI--VFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLIL 67
            ||...||:.:.:  .||.:|::.|..:....|::.||....:|:.||.:||.||:.:|:...|..
Mouse    40 GTQDDSLTLASVNTDFAFSLYKKLALKNQDKNIVFSPLSISAALALVSLGAKGKTMEEILEGLKF 104

  Fly    68 GVSNKSEV-AKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNY 131
            .::...|. ..|...:.....|..:....:.:...:::.::.:|..:|::.....:..||::.::
Mouse   105 NLTETPEADIHQGFGNLLQSLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADF 169

  Fly   132 LNPEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWI 196
            ..|.::...:|.::...|...::.|.:.  .:..:.::|||.::|:.||...|..|.|...:|::
Mouse   170 QQPTEAKNLINDYVSNQTQGMIKKLISE--LDDGTLMVLVNYIYFKGKWKISFDPQDTFESEFYL 232

  Fly   197 NPRQRMEVSMMR-QIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDM 260
            :.::.::|.||: ::...|:...::|...:|:|.: ..|.:.::|||             .|..|
Mouse   233 DEKRSVKVPMMKMKLLTARHFRDEELSCSVLELKY-TGNASALLILP-------------DQGRM 283

  Fly   261 NEVAAKSLMKEV--------------DVTIPKFRIECTVDLKVP-LQKMGINSVFDAGQADLSDL 310
            .:|.| ||..|.              ::.:|||.|.....|:.. |.:|||..|| ..|||||.:
Mouse   284 QQVEA-SLQPETLRKWRKTLFSSQIEELNLPKFSIASDYRLEEDVLPEMGIKEVF-TEQADLSGI 346

  Fly   311 FEMKTPQKISEARHKVFLNVTEFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVFAI--RDRKNV 373
            .|.| ...:|:..||..|:|.|.|.|.|....|...:.|.......|  :|||:..|  ...:::
Mouse   347 TEAK-KLSVSQVVHKAVLDVAETGTEAAAATGVIGGIRKAVLPAVCF--NRPFLIVIYHTSAQSI 408

  Fly   374 YFVGHFVKP 382
            .|:.....|
Mouse   409 LFMAKVNNP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 90/379 (24%)
Serpina3kNP_035588.2 SERPIN 57..417 CDD:214513 88/380 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.