DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn47C and Serpini1

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_033276.1 Gene:Serpini1 / 20713 MGIID:1194506 Length:410 Species:Mus musculus


Alignment Length:399 Identity:104/399 - (26%)
Similarity:192/399 - (48%) Gaps:40/399 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GTTAPSLSASPIVFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKL-ILG 68
            |.|.|..:.:.  ::.|::..|.......|::.||.....||.::.:||.|.:..|:|..: ..|
Mouse    18 GATFPDETITE--WSVNMYNHLRGTGEDENILFSPLSIALAMGMMELGAQGSTRKEIRHSMGYEG 80

  Fly    69 VSNKSEVAKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLN 133
            :....|.:  ....:::..|..:....::|...|:|.....:..:|..|...:||||...:::..
Mouse    81 LKGGEEFS--FLRDFSNMASAEENQYVMKLANSLFVQNGFHVNEEFLQMLKMYFNAEVNHVDFSQ 143

  Fly   134 PEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINP 198
            .......:|||:|.:|...:::|.:||.|:..:::.|:|:::|:..|...|..:.|:...|..:.
Mouse   144 NVAVANSINKWVENYTNSLLKDLVSPEDFDGVTNLALINAVYFKGNWKSQFRPENTRTFSFTKDD 208

  Fly   199 RQRMEVSMMRQIGQFRYGESKKLKS------QILQLPFERSNLTMMIILPTAIDGLPELEEKLGQ 257
            ...:::.||.|.|:|.|||.....:      |:|::|:|...::||:.|......|..||..| :
Mouse   209 ESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLALSRQEVPLATLEPLL-K 272

  Fly   258 LDMNEVAAKSLMKE-VDVTIPKFRIECTVDLKVPLQKMGINSVF--DAGQADLSDLFEMKTPQKI 319
            ..:.|..|.|:.|: |:|.:|:|.:|..:|||..|:.:|:..:|  ||....:||..|:    .:
Mouse   273 AQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIFIKDANLTAMSDKKEL----FL 333

  Fly   320 SEARHKVFLNVTEFGCEVAPE---------AEVQPEVLKKNPDRKFFKADRPFVFAIRDRKN--V 373
            |:|.||..:.|.|.|.|.|..         |.:.|:|:          .|.||::.||:||:  :
Mouse   334 SKAVHKSCIEVNEEGSEAAAASGMIAISRMAVLYPQVI----------VDHPFLYLIRNRKSGII 388

  Fly   374 YFVGHFVKP 382
            .|:|..:.|
Mouse   389 LFMGRVMNP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 100/381 (26%)
Serpini1NP_033276.1 neuroserpin 23..410 CDD:239003 101/394 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.