DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and srp-8

DIOPT Version :10

Sequence 1:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:374 Identity:91/374 - (24%)
Similarity:163/374 - (43%) Gaps:19/374 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LSASPIVFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSEV 75
            ||.|...||..|   |:.:....:.:.||.....|:..::..|.|::..::...|....::...|
 Worm    11 LSKSEAEFALKL---LHQQDHSQSFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDGEMV 72

  Fly    76 AKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSVKK 140
            .  |..:.:...|..||...:::...:......|..:...|.....:|.|..|.:..|.::::|.
 Worm    73 T--HFSNVSTALSAMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKT 135

  Fly   141 VNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRMEVS 205
            :||.:.::|...::.:.|....:.|..|:.:::..|.|:|...|.:..|...:|:........:.
 Worm   136 INKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHRNIK 200

  Fly   206 MMRQIGQFR-YGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDMNEVAAKSLM 269
            .:...|..| |.|:.|.  |:|.||:..|:..|.|.||....||.|..:.||...:.|:.:....
 Worm   201 FLHATGANRKYCENDKF--QVLSLPYTDSSFEMTIFLPKEQFGLAEALKTLGTSTIQELKSNVSN 263

  Fly   270 KEVDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARHKVFLNVTEFG 334
            ..|:|.||.:|.|..:||...||.:||..:.:. .|.:.:..|   ...|||..||..:.|.|.|
 Worm   264 YLVNVQIPIWRNETEIDLNSTLQAIGITKILNE-SAYIGNFAE---NVHISEFIHKAIIEVNENG 324

  Fly   335 CEVAPEAEVQPEVLKK----NPDRKFFKADRPFVFAIRDRKNVYFVGHF 379
            ...|...:|   :.|:    ..:.:.|.||.||::.|..:.::.|:|.|
 Worm   325 TSPATNTKV---ITKRWREETGEIRDFIADHPFLYTIHYKNSILFMGVF 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 89/372 (24%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 88/369 (24%)

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