DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and Serpinb2

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001167641.1 Gene:Serpinb2 / 18788 MGIID:97609 Length:415 Species:Mus musculus


Alignment Length:423 Identity:110/423 - (26%)
Similarity:200/423 - (47%) Gaps:62/423 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LSASPIVFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKL------ILGV 69
            ||.:..:||.||.:.:.......|:.:||....|.:.:|.:||||.:..::...|      ..|:
Mouse     4 LSMANTMFALNLLKQIEKSNSTQNIFISPWSISSTLAIVLLGAGGNTEQQMAKVLQFNEIGSYGI 68

  Fly    70 SNKS-------EVAKQ-HAESWTDECSCAKKG--------------------VALRLVTRLYVNE 106
            :.::       :.|:| ..|::......|:.|                    ..|....:|:..:
Mouse    69 TTRNPENFSGCDFAQQIQKENYPSAILQAQAGDKIHSAFSSLSSTINTPQGDYLLESANKLFGEK 133

  Fly   107 EEKIRTDFNDMALEFFNAEAYSLNYLN-PEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVIL 170
            ..:.:.::..::.::::.|..::::|. .|::.:|:|.|::..|...:.||......:.|:.::|
Mouse   134 SARFKEEYIQLSKKYYSTEPEAVDFLECAEEAREKINSWVKTQTKGEIPNLLPEGSVDEDTKMVL 198

  Fly   171 VNSLFFRAKWNKIFPQQLTQIDDFWINPRQRMEVSMMRQIGQFRYGESKKLKSQILQLPFERSNL 235
            ||:::|:.||...|.::|..:..|.:|..:.:.|.||....:...|..|.||:|||:|| ...|:
Mouse   199 VNAVYFKGKWKTPFEKKLNGLYPFRVNSHESIPVQMMFLHAKLNIGYIKDLKTQILELP-HTGNI 262

  Fly   236 TMMIILPTAID----GLPELEEKLGQLDMNEVAAKSLMKEVDVT--IPKFRIECTVDLKVPLQKM 294
            :|:::||..|:    ||..||.::...:.|:..:|..:.|.||.  ||||::..:.:||..||.|
Mouse   263 SMLLLLPDEIEDASTGLELLESEINFANFNKWISKDTLDEDDVVVYIPKFKLAQSYELKSILQSM 327

  Fly   295 GINSVFDAGQADLS------DLFEMKTPQKISEARHKVFLNVTEFGCEVA--PEAEVQPEVLKKN 351
            |:...|:.|:|:.|      |||       :||..|:..::|||.|...|  ..|.:........
Mouse   328 GMEDAFNKGKANFSGMSERNDLF-------LSEVFHQASVDVTEEGTVAAGGTGAVMTGRTGHGG 385

  Fly   352 PDRKFFKADRPFVFAIRDR--KNVYFVGHFVKP 382
            |.   |.||.||:|.|.|:  ..:.|||.|..|
Mouse   386 PQ---FVADHPFLFFIMDKITHTILFVGRFSSP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 106/411 (26%)
Serpinb2NP_001167641.1 SERPIN 4..415 CDD:294093 109/421 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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