DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and srp-2

DIOPT Version :10

Sequence 1:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:353 Identity:99/353 - (28%)
Similarity:172/353 - (48%) Gaps:29/353 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSEVAKQHAESWTDECSCAKKGVALRL 98
            ::::||......:.|:..||.|.:..||..  :||.|...|......|:..|    ...||..::
 Worm    24 SVVLSPLSISLGLALIHAGACGSTQKELED--VLGGSRIFEEFSGLMEAVGD----TDNGVETKI 82

  Fly    99 VTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSVKKVNKWLEKHTFYTVRNLFTPEVFN 163
            |.|::||:...|..|:.:...:.:.|...||::...|.:.|.:|.::|.||...:::|...:..|
 Worm    83 VNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSAN 147

  Fly   164 SDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRMEVSMMRQIGQFR-YGESKKLKSQILQ 227
             ::...|||:::|:|.|...|.::.|...:|:.:..:..::..:.::.:.| |.|.  :..|:|.
 Worm   148 -NAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTED--VLFQVLS 209

  Fly   228 LPFERSNLTMMIILPTAIDGLPELEEKLGQLDMNEVAAKSLMKE-----VDVTIPKFRIECTVDL 287
            |.:.....|:.|.||....||.:..||:     |....::|:.:     |.|.||||:||..:||
 Worm   210 LKYADPKFTLAIFLPKQRFGLVDALEKI-----NGEYIQNLLNDLKSSYVSVQIPKFKIEKELDL 269

  Fly   288 KVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARHKVFLNVTEFGCEVAPEA--EVQPE-VLK 349
            |..|:.:||..:|..| ||||.:.:...   ||...||..:.|.|.|...|..:  :||.| ::.
 Worm   270 KETLEAIGIKEIFAEG-ADLSGIADKVF---ISSGIHKAIIEVDEDGTTAAAASAFKVQLEMMIM 330

  Fly   350 KNPDRKFFKADRPFVFAIRDRKNVYFVG 377
            ..|.:  |.||.||:||:....:..|:|
 Worm   331 AEPTQ--FVADHPFLFAVLFENHTLFLG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 99/353 (28%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 99/353 (28%)

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