DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and Serpina3c

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:401 Identity:98/401 - (24%)
Similarity:182/401 - (45%) Gaps:48/401 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GTTAPSLSASPI--VFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLIL 67
            ||...||:.:.|  .||.:|::.|..:.|..|::.||....:|:.:|.:||.|.:.:|:...|..
Mouse    58 GTQLDSLTLASINTDFAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNF 122

  Fly    68 GVSNKSEV-AKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNY 131
            .::...|. ..|.........|...:.|.:...:.|:|.:..:|..:|.:.|...:.|||::.::
Mouse   123 NLTETPEADIHQGFGHLLQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADF 187

  Fly   132 LNPEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWI 196
            ..|.::.|.:|.::...|...::.|.:.  .::|:.::|||.::|:.||...|..:.|...:|::
Mouse   188 QQPLEATKLINDYVSNQTQRKIKGLISD--LDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYL 250

  Fly   197 NPRQRMEVSMMR-QIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDM 260
            :.::.::|.||: :.....|...::|...:::|.: :.|.:.:.|||             .|..|
Mouse   251 DVKRSVKVPMMKIKTLTTPYFRDEELSCTVVELKY-KGNASALFILP-------------DQGRM 301

  Fly   261 NEVAAKSLMKEV--------------DVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLF 311
            .:|.| ||..|.              ::.:|||.|.....||..|.::||..:| :.|||||.: 
Mouse   302 QQVEA-SLQPETLRKWKNSLRPRKMGELYLPKFSISTDYSLKNILPELGIKEIF-SKQADLSGI- 363

  Fly   312 EMKTPQK---ISEARHKVFLNVTEFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVFAI--RDRK 371
               |..|   :|:..||..|:|.|.|.|......|...:|.:.....|   :|.|:..|  .|.:
Mouse   364 ---TGTKDLIVSQMVHKAVLDVAETGTEGVAATGVNFRILSRRTSLWF---NRTFLMVISHTDVQ 422

  Fly   372 NVYFVGHFVKP 382
            ...|:.....|
Mouse   423 TTLFIAKITHP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 92/381 (24%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 98/401 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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