DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn47C and Serpina3a

DIOPT Version :10

Sequence 1:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:Serpina3a / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:379 Identity:98/379 - (25%)
Similarity:175/379 - (46%) Gaps:41/379 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLSASPIVFARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSE 74
            :||:....||.:|::.|..:.|..|::.|.....:|:.|:.:||...:..|:...|...::...|
  Rat    36 TLSSCNTDFAFSLYKELVLKNPDKNIVFSSFSISTALVLLSLGAKNNTLKEILEGLKFNLTETPE 100

  Fly    75 V-AKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSV 138
            . ..|..|......:.....|.:...:.|::.:..:|..:|.:.|...:.|||:|.::..|.::.
  Rat   101 AEIHQGYEHLLQRLNLPGDQVQISTGSALFIKKHLQILAEFQEKARALYQAEAFSTDFQQPHEAK 165

  Fly   139 KKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRME 203
            |.:|.::.|.|...::.|.:  |.:..:|::|||.::|:.||...|....|...:|:::.::.::
  Rat   166 KLINDYVRKQTQGKIKELIS--VLDKKTSMVLVNYIYFKGKWKMPFDPHDTFQSEFYLDEKKSVK 228

  Fly   204 VSMMRQIGQFR--YGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDMNEVAAK 266
            |.||: |.:..  |...::|...:|:|.: ..|.:.:.|||             .|..|.:|.| 
  Rat   229 VPMMK-IEKLTTPYFRDEELSCSVLELKY-TGNASALFILP-------------DQGRMQQVEA- 277

  Fly   267 SLMKEV--------------DVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQ 317
            ||..|.              ::.:|||.|...:.|...|.::||..|| :.|||||.:...| ..
  Rat   278 SLQPETLRRWKDTLRPRRIDELRMPKFSISTDMRLGDILPELGIREVF-SQQADLSRITGAK-DL 340

  Fly   318 KISEARHKVFLNVTEFGCEVAPEAEVQ--PEVLKKNPDRKFFKADRPFVFAIRD 369
            .:|:..||..|:|||.|.|.|....|:  |...|......:|  :|||:..|.|
  Rat   341 SVSQVVHKAVLDVTETGTEAAAATGVKIIPMCAKFYYVTMYF--NRPFLMIISD 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 96/376 (26%)
Serpina3aXP_006240581.2 serpinA3_A1AC 27..408 CDD:381019 98/379 (26%)

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