DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn47C and serpina10

DIOPT Version :9

Sequence 1:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_012824917.1 Gene:serpina10 / 100487295 XenbaseID:XB-GENE-983018 Length:437 Species:Xenopus tropicalis


Alignment Length:391 Identity:92/391 - (23%)
Similarity:178/391 - (45%) Gaps:58/391 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FARNLFRAL---NDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKL-------------- 65
            |..||:|.:   :|.    |:..||......::.:.:|..|.:.|:|...|              
 Frog    76 FGFNLYRKIANKHDN----NIFFSPFSVSLGLSSLLLGTRGNTYDQLLHGLNYNPFKDQENPYLL 136

  Fly    66 -ILGVSNKSEVAKQHAESWTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSL 129
             .|..:.|.::||             .:.:.|.:.:..:::|...::.:|.::..::|:.| |.|
 Frog   137 PELLKTIKEKIAK-------------NEELVLNIGSLSFLHETFSMKDEFVNLTKKYFDME-YEL 187

  Fly   130 NYLNPEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDF 194
            ...:...:..::|.::||.|...:.|.:  :..:..:.::|::.:||:.||...|...||::|.|
 Frog   188 IDFHSSKAKNEINAYVEKLTKGLISNFY--DFIDPQTKLLLLDYIFFKGKWQYPFNPALTEVDSF 250

  Fly   195 WINPRQRMEVSMMRQIGQFRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLD 259
            :|:....:.|.||.:..:......|.|...:.:||: |.|..|:||.|........||:.|.:..
 Frog   251 FIDKYNSVTVPMMYKTDKVASVFDKDLSCTVFKLPY-RGNAHMLIIKPEKEGDFGILEDHLTKEL 314

  Fly   260 MNEVAAKSLMKEVDVTIPKFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARH 324
            :|...||...::.|:..|||:::....||..|.::||..:| .|:|:|:||.|.:. ..::|...
 Frog   315 INSWQAKMQSRKTDIFFPKFKLDQKYKLKSSLNELGIKELF-TGKANLTDLTEERN-LMLTEITQ 377

  Fly   325 KVFLNVTEFGCEVAPEAEVQ------PEVLKKNPDRKFFKADRPFVFAIRDR--KNVYFVGHFVK 381
            :..:.|.|.|.|.|..|..:      |..::.|         |||:|.|.:.  :::.|:|..:.
 Frog   378 QAMIEVDERGTEAAAVAGAEIIAYSLPLTIRVN---------RPFLFMIFEEAYQSLLFLGRVMD 433

  Fly   382 P 382
            |
 Frog   434 P 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 91/386 (24%)
serpina10XP_012824917.1 serpinA10_PZI 58..436 CDD:381011 92/391 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.