DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp47a and Obp56f

DIOPT Version :9

Sequence 1:NP_610632.1 Gene:Obp47a / 36162 FlyBaseID:FBgn0033573 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_725926.1 Gene:Obp56f / 246668 FlyBaseID:FBgn0043533 Length:125 Species:Drosophila melanogaster


Alignment Length:104 Identity:31/104 - (29%)
Similarity:51/104 - (49%) Gaps:9/104 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TEEMIRLC-GDQTDISLRELNKLQREDFSDPSESVQCFTHCLYEQMGLM-HDGVFVE--RDLFGL 101
            :.|.|:.| ..|...::.|..|.   |..:.|...:||.|||.|..|:: :|.:..|  |.:...
  Fly    22 SSEKIKACLKRQLGYTITENTKF---DAKEDSLQSKCFYHCLLEVKGVIANDAISSEQPRKVLEK 83

  Fly   102 LSDVSNTDYW--PERQCHAIRGNNKCETAYRIHQCQQQL 138
            ...:::||..  .|.:||:|:.:.|||..|.|.:|.|.:
  Fly    84 KYGITDTDELEKAEEKCHSIKASGKCELGYEILKCYQSI 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp47aNP_610632.1 PBP_GOBP 48..132 CDD:279703 26/89 (29%)
Obp56fNP_725926.1 PBP_GOBP <52..120 CDD:279703 22/67 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006711
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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