DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and AVT6

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_011044.1 Gene:AVT6 / 856855 SGDID:S000000921 Length:448 Species:Saccharomyces cerevisiae


Alignment Length:508 Identity:110/508 - (21%)
Similarity:176/508 - (34%) Gaps:186/508 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ISLLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQ--VSM 115
            ::||....|.||||||.||:..|.:.|.:|.:|.......|:.:      :....:.|||  .|.
Yeast    10 LTLLHTACGAGILAMPYAFKPFGLIPGVIMIVLCGACAMQSLFI------QARVAKYVPQGRASF 68

  Fly   116 PEAVRIAYEEGPKW---------INCFGRAAGFMTTCVLVFGQFL-------------------L 152
            ....|:.   .|..         |.|||....:|    :|.|..:                   :
Yeast    69 SALTRLI---NPNLGIVFDLAIAIKCFGVGVSYM----IVVGDLMPQIMSVWTRNAWLLNRNVQI 126

  Fly   153 CTVYLVFVSKNFKEIGDHYIERYNE-RYYVLVA-------CLLLL-----PLFMIRRLK----YL 200
            ..:.|.||:..      .::::.|. ||..:||       |:|:|     |...|.|||    ||
Yeast   127 SLIMLFFVAPL------SFLKKLNSLRYASMVAISSVAYLCVLVLLHYVAPSDEILRLKGRISYL 185

  Fly   201 VP-----LNLISNFLLYAGFALIMYYLFNGLPNINDREMVTPPVEWIEFIAIAAFSLTAVGSMLV 260
            :|     ||:::...::. ||...::  |....||::.  :...|.:..|.:.|.||.       
Yeast   186 LPPQSHDLNVLNTLPIFV-FAYTCHH--NMFSIINEQR--SSRFEHVMKIPLIAISLA------- 238

  Fly   261 VEAHMAHPQSYLGLFGVLNLAVLFILLSNMFFGIIGYWRFGDNVHASITLNIPQDEILSQFIKVF 325
                                .:|:|.:     |..||..||||:..:|.:..|| .:.|...::.
Yeast   239 --------------------LILYIAI-----GCAGYLTFGDNIIGNIIMLYPQ-AVSSTIGRIA 277

  Fly   326 IASGIFLSYPLNGF-----------------VVITVMFSD------------------------- 348
            |...:.|::||...                 |.|:...:|                         
Yeast   278 IVLLVMLAFPLQCHPARASIHQILQHFAEENVSISATSADEPTVATESSPLIRDSSLDLNEVIEE 342

  Fly   349 ---YENSEPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVF 410
               |:..|...|.::.|  |:....|..:..|||.|.:||.:..:.||...::::.:.|.|.   
Yeast   343 ESIYQPKETPLRGKSFI--VITCSILVASYLVAISVSSLARVLAIVGATGSTSISFILPGLF--- 402

  Fly   411 LNYNVGYGRLMWKLI-----------------RDILLILIGLIFGIVGCTVAL 446
                 ||     |||                 ..:||.:.|||..|...|.||
Yeast   403 -----GY-----KLIGTEHKTAVPLTTKIFKYTGLLLFIWGLIIMITCLTAAL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 95/450 (21%)
AVT6NP_011044.1 Aa_trans 1..439 CDD:279788 106/500 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345996
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4217
OMA 1 1.010 - - QHG54358
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
TreeFam 00.000 Not matched by this tool.
65.700

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