DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and AVT2

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_010850.1 Gene:AVT2 / 856645 SGDID:S000000790 Length:480 Species:Saccharomyces cerevisiae


Alignment Length:435 Identity:87/435 - (20%)
Similarity:181/435 - (41%) Gaps:71/435 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AFISLLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRR---RVPQ 112
            ||::|...::|.||:..|.|.:.:|.:.|.:..:.|..::.:::.|::.::|...:|.   .|..
Yeast    72 AFMNLANSILGAGIITQPFAIKNAGILGGLLSYVALGFIVDWTLRLIVINLTLAGKRTYQGTVEH 136

  Fly   113 VSMPEA-VRIAYEEGPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHYIERYN 176
            |...:. :.|.:..|   :..||...|:   |::: |..:...:..:| |:|...:  |:..|.|
Yeast   137 VMGKKGKLLILFTNG---LFAFGGCIGY---CIII-GDTIPHVLRAIF-SQNDGNV--HFWLRRN 191

  Fly   177 ERYYVLVACLLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMYYLFNGLPNINDREMVTPPVEW 241
            . ..|:|...:..||.|.|.::.|..    ::||......:|:..:....|.:        |.:|
Yeast   192 V-IIVMVTTFISFPLSMKRNIEALSK----ASFLAVISMIIIVLTVVIRGPML--------PYDW 243

  Fly   242 -------IEFIAIAAF--SLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAV--------LFILLSN 289
                   .:|...|..  ||:.:...||..    |..|:: .|.:.|.:|        :.|::|.
Yeast   244 KGHSLKLSDFFMKATIFRSLSVISFALVCH----HNTSFI-FFSMRNRSVAKFTRLTHISIIISV 303

  Fly   290 MFFGIIGYWRFG---DNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGFVVITV------- 344
            :...::||..|.   :....::..:.|..:......::.....:..::|:..||:..|       
Yeast   304 ICCALMGYSGFAVFKEKTKGNVLNSFPGTDTAINIARLCFGFNMLTTFPMEIFVLRDVVGNLLHE 368

  Fly   345 --MFSDY-ENSEPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPAL 406
              :..:| |:::..|:...    |:....:|:|..:::...||.||.||.||.:.|.:..:.|..
Yeast   369 CNLIKNYDEHTQLSGKQHV----VITSSLVFITMGISLTTCNLGALFELIGATTASTMAYILPPY 429

  Fly   407 IDVFLNYNVGYGRLMWK-LIRDILLILIGLIFGIVGCTVALMQLI 450
            .::.|...    :..|| .:...|.|..|.:..|:..|..::..:
Yeast   430 TNLLLTSK----KKSWKERLPFYLCICFGFMIMIISSTQTIIDAV 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 79/389 (20%)
AVT2NP_010850.1 Aa_trans 65..467 CDD:279788 87/430 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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