DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and AVT3

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_012776.1 Gene:AVT3 / 853710 SGDID:S000001629 Length:692 Species:Saccharomyces cerevisiae


Alignment Length:471 Identity:106/471 - (22%)
Similarity:200/471 - (42%) Gaps:61/471 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEPKSQDQAPNRDDPD---LQTEPLTIAQSITSFYMYNPYEKRSVEVPLTNCDAFISLLKCVIGT 62
            :..:.:::....::|:   |:||.   .|.::..:..:|::..:|:       |.:.|||..:||
Yeast   259 LSEEEEEEEETEEEPEEEALETES---TQLVSREHGRHPHKSSTVK-------AVLLLLKSFVGT 313

  Fly    63 GILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAVRIAYEEGP 127
            |:|.:|.||...|:.. :.:.:|...|::|...:.:....:     :|......:..||.|  ||
Yeast   314 GVLFLPKAFHNGGWGF-SALCLLSCALISYGCFVSLITTKD-----KVGVDGYGDMGRILY--GP 370

  Fly   128 KWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHYIE----RYNERYYVLVACLLL 188
            |        ..|.....:...|......|.||.:.|.:...:::..    ..:...|:....|:.
Yeast   371 K--------MKFAILSSIALSQIGFSAAYTVFTATNLQVFSENFFHLKPGSISLATYIFAQVLIF 427

  Fly   189 LPLFMIRRLKYLVPLNLISNFLLYAGFALI----MYYL-FNGLPNINDREMVTPPVEWIEFIAIA 248
            :||.:.|.:..|....||::..:..|...:    :||: .||:  .:|..::....:|..||..|
Yeast   428 VPLSLTRNIAKLSGTALIADLFILLGLVYVYVYSIYYIAVNGV--ASDTMLMFNKADWSLFIGTA 490

  Fly   249 AFSLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAVLFILLSNMFFGIIGYWRFGDNVHASITLNIP 313
            .|:...:|.::.::..|.||:.:......:...|..|.:|   .|::.|..||.:|...:.||.|
Yeast   491 IFTFEGIGLLIPIQESMKHPKHFRPSLSAVMCIVAVIFIS---CGLLCYAAFGSDVKTVVLLNFP 552

  Fly   314 QDEILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYEN----SEPRGRYRTLIEYV---VRLLFL 371
            ||...:..:::..|..|.||.||..|..|.::    ||    |...|:|...::::   .|...:
Yeast   553 QDTSYTLTVQLLYALAILLSTPLQLFPAIRIL----ENWTFPSNASGKYNPKVKWLKNYFRCAIV 613

  Fly   372 FLTGAVA-IGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNVGYGRLMWKLIRDILLILIGL 435
            .||..:| :|..:|.....|.|:|:...|..:.|.|:....:...|..|..      :||.||.:
Yeast   614 VLTSILAWVGANDLDKFVSLVGSFACIPLIYIYPPLLHYKASILSGTSRAR------LLLDLIVI 672

  Fly   436 IFGIVGCTVALMQLIR 451
            :||:........|.|:
Yeast   673 VFGVAVMAYTSWQTIK 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 88/373 (24%)
AVT3NP_012776.1 Aa_trans 295..687 CDD:279788 99/429 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I928
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I1099
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm9188
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
TreeFam 00.000 Not matched by this tool.
76.860

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