DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and AVT1

DIOPT Version :10

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_012534.1 Gene:AVT1 / 853457 SGDID:S000003761 Length:602 Species:Saccharomyces cerevisiae


Alignment Length:433 Identity:83/433 - (19%)
Similarity:165/433 - (38%) Gaps:90/433 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAVR 120
            :..:||.|:||:||..:.:|:|:|..| :.:..|.|:    ..|::...|.......:|..:...
Yeast   218 INVLIGIGLLALPLGLKYAGWVIGLTM-LAIFALATF----CTAELLSRCLDTDPTLISYADLGY 277

  Fly   121 IAYEEGPKWINCFGRA----------AGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHYIERY 175
            .|:  |.|     |||          .|...:.|::||..|                 :....:|
Yeast   278 AAF--GTK-----GRALISALFTLDLLGSGVSLVILFGDSL-----------------NALFPQY 318

  Fly   176 NERYYVLVACLLLLPLFMIRRLKYLVPLNLISNFLLY-----AGFALI-----MYYLFNGLPNIN 230
            :..::.:|:..::.|       ...:||:::||..|.     .|..|:     :|...:....:|
Yeast   319 STTFFKIVSFFIVTP-------PVFIPLSVLSNISLLGILSTTGTVLVICCCGLYKSSSPGSLVN 376

  Fly   231 DREMVTPPVEWIEFIAIAAFSLTAV-GSMLV---VEAHMAHPQSYLGLFGVLNLAVLFILLSNMF 291
            ..|....|:: ::.:.::...|:|. |...|   ::..|.||..:.   ..|........::::.
Yeast   377 PMETSMWPID-LKHLCLSIGLLSACWGGHAVFPNLKTDMRHPDKFK---DCLKTTYKITSVTDIG 437

  Fly   292 FGIIGYWRFGDNVHASITLNIPQDEILSQFIKVFIASGIFL----SYPLNGFVVITVM------- 345
            ..:||:..||:.|...||.|:...|...:|:...|::.:.:    ..|||...:::|:       
Yeast   438 TAVIGFLMFGNLVKDEITKNVLLTEGYPKFVYGLISALMTIIPIAKTPLNARPIVSVLDVLMNVQ 502

  Fly   346 FSDYENSEPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVF 410
            ..|...|..:.|....::...|:....:...:||..|....:....||.....:.|:.|...   
Yeast   503 HIDEAASAIKRRAAKGLQVFNRIFINVVFVLIAINFPEFDKIIAFLGAGLCFTICLILPCWF--- 564

  Fly   411 LNYNVGYGRLM------WKLIRDILLILIGLIFGIVGCTVALM 447
                  |.||.      |:.:...:.|.|.::...:|...|::
Yeast   565 ------YLRLCKTTIKPWERVACHVTICISVVLSTLGVGAAII 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:444915 75/385 (19%)
AVT1NP_012534.1 Aa_trans 206..601 CDD:279788 83/431 (19%)

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