DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polyph and AVT5

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_009464.2 Gene:AVT5 / 852189 SGDID:S000000185 Length:459 Species:Saccharomyces cerevisiae


Alignment Length:441 Identity:88/441 - (19%)
Similarity:162/441 - (36%) Gaps:107/441 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ISLLKCVIGTGILAMPLAFRCSGFVMGT-------VMSILLMILLT-------YSIHLLIADMTE 103
            ::||....|.|:||||.||:..|.:.|.       :.|:..::|.|       .|.:...|.:|:
Yeast    10 LTLLHTACGAGVLAMPFAFKPFGLMPGLITLTFCGICSLCGLLLQTRIAKYVPKSENASFAKLTQ 74

  Fly   104 CCRRRRVPQVSMPEAVRIAYEEGPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFV--SKNFKE 166
            ...    |.:|:.....||       :.|||....::    ::.|..:...|..:|.  ..|...
Yeast    75 LIN----PSISVVFDFAIA-------VKCFGVGVSYL----IIVGDLVPQIVQSIFYRNDDNMSG 124

  Fly   167 IGDHYIERYNERYYVLVACLLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMYYLFNG------ 225
            ..:|::......|..|:...::.||...|.|..|...::|:...:.....||:|:..|.      
Yeast   125 SQEHHMFLDRRLYITLIIVFVISPLCFKRSLNSLRYASMIAIVSVAYLSGLIIYHFVNRHQLERG 189

  Fly   226 -----LPNINDREMVTPPVEWIEFIAIAAFSLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAVLFI 285
                 :|: .|.:..:|    :..:.|..|:.|...:|..|........     |.|:....:|.
Yeast   190 QVYFMVPH-GDSQSHSP----LTTLPIFVFAYTCHHNMFSVINEQVDKS-----FKVIRRIPIFA 244

  Fly   286 LLSNMFFGII----GYWRFGDNVHASITLNIPQDEILSQFIKVFIASGIFLSYPL---------N 337
            ::...|..||    ||..||:|:..:| |.:..:.|.:...::.:...:.|::||         .
Yeast   245 IVLAYFLYIIIGGTGYMTFGENIVGNI-LTLYPNSISTTIGRLAMLLLVMLAFPLQCHPCRSSVK 308

  Fly   338 GFVVITVMF---------------------------SDYENSEPRGRYRTLIEY-VVRLLFLFLT 374
            ..::....|                           :...|.||..|..:|... ::.|..|..:
Yeast   309 NIIIFIENFRKGKLYDNRASFIPLDNFNSEDPQEAPTQQNNEEPNLRSESLRHINIITLCILLFS 373

  Fly   375 GAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNVGYGRLMWKLI 425
            ..:||.:.:||.:..:.||...::::.:.|.|.        ||     |||
Yeast   374 YLLAISITSLAKVLAIVGATGSTSISFILPGLF--------GY-----KLI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 82/421 (19%)
AVT5NP_009464.2 Aa_trans 1..445 CDD:279788 88/441 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345995
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
TreeFam 00.000 Not matched by this tool.
54.750

Return to query results.
Submit another query.