DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polyph and AT3G56200

DIOPT Version :10

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_191179.1 Gene:AT3G56200 / 824786 AraportID:AT3G56200 Length:435 Species:Arabidopsis thaliana


Alignment Length:416 Identity:96/416 - (23%)
Similarity:168/416 - (40%) Gaps:77/416 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMT--ECCRRRRVPQVSMPEAVRI 121
            :||.||::||.||:..|.|...::..::..|.|.|:..|:....  |......|.:.|..:...|
plant    36 IIGAGIMSMPAAFKVLGIVPAFLIITIIAWLSTISVGFLMKSTLAGESTTYAGVMKESFGKTGSI 100

  Fly   122 AYEEGPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHYI---------ERYNE 177
            |.:               :.|.|..||..::.::.:..|....:..|..:|         ..:|.
plant   101 AVQ---------------IATMVATFGCMIIFSIIIGDVLSGNENGGPEHIGVLQEWFGSYWWNT 150

  Fly   178 RYYVL--VACLLLLPLFMIRRLKYLVPLNLISNFLLYAGFALI-----MYYLFNGLPNINDR--- 232
            |.:.|  |...:||||.:.||::.|...:.:| |||...|.:|     :..|.||... |.|   
plant   151 RIFALLFVYGFVLLPLVLRRRVERLAISSAVS-FLLAVLFVVISSVLAISALVNGQTK-NPRLFP 213

  Fly   233 EMVTPPVEWIEFIA----IAAFSLTAVGSMLVVEAHM-AHPQSY-----LGLFGVLNLAVLFILL 287
            |:......|..|.|    :.||:.           |. .||..:     |.:.....::|  ||.
plant   214 ELSNGGSFWQLFTASPVIVTAFTF-----------HFNVHPIGFELKDPLQVIPATKISV--ILC 265

  Fly   288 SNMFF--GIIGYWRFGDNVHASITLNIPQD------EILSQFIKVFIASGIFLSYPLNGFVV--- 341
            :.::|  |:.||..|||...:.|.:|..|.      .:|:..:::.....:.|.:||..|.:   
plant   266 AAIYFATGLFGYLLFGDATMSDILVNFDQSSGSSIGSLLNDIVRLSYVLHLMLVFPLLNFSLRAN 330

  Fly   342 ITVMFSDYENSEPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPAL 406
            :..:....:.|..:...|.:...:..|:..||:   ||.||::....:..|:....::..:.||.
plant   331 LDELLYPKKPSLEKDTKRFIGLTLALLICCFLS---AIAVPDIWYFFQFMGSTITVSIAFIFPAA 392

  Fly   407 IDVFLNYNVGYGRLMWKLIRDILLIL 432
            | |..|.: |......|::..|:|:|
plant   393 I-VLRNIH-GVSTSREKIVAAIMLVL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:444915 88/389 (23%)
AT3G56200NP_191179.1 SLC5-6-like_sbd 21..426 CDD:444915 96/416 (23%)

Return to query results.
Submit another query.