DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and AT3G28960

DIOPT Version :10

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_189538.2 Gene:AT3G28960 / 822536 AraportID:AT3G28960 Length:405 Species:Arabidopsis thaliana


Alignment Length:436 Identity:87/436 - (19%)
Similarity:165/436 - (37%) Gaps:100/436 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLT-YSIHLLIADMTECCRRRR----VPQVSM 115
            |..:.|.|||::|.:....|::.   :|:||::.:| :...|||   |:|....|    .|.:..
plant    26 LNALSGIGILSVPYSLARGGWLS---LSLLLLLAVTAFYTSLLI---TKCMNADRNIKTYPDIGE 84

  Fly   116 PEAVRIAYEEGPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHY-IE----RY 175
                           ..|||....:.:..:....:|:.|.:|:....|...:...: ||    |.
plant    85 ---------------RAFGRPGRIIVSVFMHLELYLVTTGFLILEGDNLHNLFPGFTIEMIGLRL 134

  Fly   176 N-ERYYVLVACLLLLPLFMIRRLKYL------------VPLNLISNFLLYAGFA------LIMYY 221
            | ::.::.....:::|......|..|            |.|..||....:.|..      ||.: 
plant   135 NGKQAFMATVAFVIMPTLWWDNLSVLSYVSMSGVLATTVTLGSISWIGAFDGIGFHQKGKLINW- 198

  Fly   222 LFNGLPNINDREMVTPPVEWIEFIAIAAFSLTAVGSMLVVEAHMAHPQSYLGL------FGVLNL 280
              :|:|                    .|.||.|    ....||...|..|..:      ..||.:
plant   199 --SGIP--------------------TALSLYA----FCYGAHPVLPTLYSSMKSKHQFNNVLLI 237

  Fly   281 AVLFILLSNMFFGIIGYWRFGDNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGF-VVITV 344
            ..:...:......::||..:|....:.||||:|..:..|:     :|....|..|:..: ::||.
plant   238 CFILCTIGYTSMAVLGYLMYGSQTLSQITLNLPIHKTSSK-----VAIYTTLVNPVAKYALMITP 297

  Fly   345 MFSDYENSEPRGRY--RTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPAL- 406
            ..:..::..| .||  :..:..::...|:..:..:|..:|....:..|.||.....:::|.|.| 
plant   298 TVNTIKDWFP-SRYSKKAYLHLLISTFFIISSVVIAETLPFFGYMMSLVGALLSVTVSILLPCLC 361

  Fly   407 -IDVFLNY-NVGYGRLMWKLIRDILLILIGLIFGIVGCTVALMQLI 450
             :.:|.|| .:|...:|.     ..::::.:..|::|..:||..:|
plant   362 YLKIFGNYKKIGCETIML-----FGMVVMSVFVGVIGTYIALRDII 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:444915 77/390 (20%)
AT3G28960NP_189538.2 SLC5-6-like_sbd 14..398 CDD:444915 84/430 (20%)

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