DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and AUX1

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_565882.1 Gene:AUX1 / 818390 AraportID:AT2G38120 Length:485 Species:Arabidopsis thaliana


Alignment Length:426 Identity:88/426 - (20%)
Similarity:156/426 - (36%) Gaps:69/426 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DAFISLLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVS 114
            ||:.|.....:...:|.:|.:|...|.:.|.|:.|...:|.:::.:|:.....|...|:.....|
plant    50 DAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLYVEYRARKEKEGKS 114

  Fly   115 MPEAVRIAYEEGPKWINCFGRAAGFMTTCV-LVFGQFLLCTVYLVFVSKNFKEIGDHYIERYNER 178
            ....|...:|.....:..:.:|.|....|. |:||.    .:.|:..:.|...|.||..:|  ..
plant   115 FKNHVIQWFEVLDGLLGSYWKALGLAFNCTFLLFGS----VIQLIACASNIYYINDHLDKR--TW 173

  Fly   179 YYVLVAC---LLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMYYLFNGLPNINDREMVTPPVE 240
            .|:..||   .:.:|.|...|:...:.|.:.:....|...|.|::....|:.:....::|     
plant   174 TYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIASIIHGQAEGVKHSGPTKLV----- 233

  Fly   241 WIEFIAIAAFSLTAVGSMLVVE-AH-MAHPQSYLGLFGVLNLAVLFILLSNMFFGIIGYWRFGDN 303
             :.|........|..|..:.|| .| |..||.:..::   .:|.|::....:......||.|||.
plant   234 -LYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIY---LMATLYVFTLTIPSAAAVYWAFGDA 294

  Fly   304 V--HASITLNIPQD-----EILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYENSEPRGRYRTL 361
            :  |::....:|::     .::...|..||..| |...||  :.|...:...::......|....
plant   295 LLDHSNAFSLMPKNAWRDAAVILMLIHQFITFG-FACTPL--YFVWEKVIGMHDTKSICLRALAR 356

  Fly   362 IEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNVGYGR------- 419
            :..|:.:.||      ||..|....:....||..:|....:.|:|..: |.|.....|       
plant   357 LPVVIPIWFL------AIIFPFFGPINSAVGALLVSFTVYIIPSLAHM-LTYRSASARQNAAEKP 414

  Fly   420 -----------------LMWKLIRDILLILIGLIFG 438
                             ::|.||       :|..||
plant   415 PFFMPSWTAMYVLNAFVVVWVLI-------VGFGFG 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 78/369 (21%)
AUX1NP_565882.1 PLN03074 2..469 CDD:215559 88/426 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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