DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and LAX2

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_179701.1 Gene:LAX2 / 816640 AraportID:AT2G21050 Length:483 Species:Arabidopsis thaliana


Alignment Length:379 Identity:84/379 - (22%)
Similarity:144/379 - (37%) Gaps:47/379 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DAFISLLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVS 114
            ||:.|.....:...:|.:|.:|...|.:.|.:..:...||.:::.:|:.....|...|:...:|:
plant    44 DAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVN 108

  Fly   115 MPEAVRIAYEE-----GPKWINCFGRAAGFMTTCV-LVFGQFLLCTVYLVFVSKNFKEIGDHYIE 173
            ....|...:|.     |..|     |..|....|. |:||.    .:.|:..:.|...|.|:..:
plant   109 FRNHVIQWFEVLDGLLGKHW-----RNVGLAFNCTFLLFGS----VIQLIACASNIYYINDNLDK 164

  Fly   174 RYNERYYVLVAC---LLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMYYLFNGLPNINDREMV 235
            |  ...|:..||   .:.:|.|...|:...:.|.:.:....|...|.|::....|:.:....::|
plant   165 R--TWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASILHGQVEGVKHSGPSKLV 227

  Fly   236 TPPVEWIEFIAIAAFSLTAVGSMLVVE-AH-MAHPQSYLGLFGVLNLAVLFILLSNMFFGIIGYW 298
                  :.|........|..|..:.|| .| |..||.:..::   ..|.|::|...:......||
plant   228 ------LYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIY---LFATLYVLTLTLPSASAVYW 283

  Fly   299 RFGD------NVHASITLNIPQD-EILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYENSEPRG 356
            .|||      |..|.:..|:.:| .::...|..||..| |...||  :.|...:...:|......
plant   284 AFGDLLLNHSNAFALLPKNLYRDFAVVLMLIHQFITFG-FACTPL--YFVWEKLIGMHECRSMCK 345

  Fly   357 RYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVF 410
            |....:..|:.:.||      ||..|....:....|:..:|....:.|||..:|
plant   346 RAAARLPVVIPIWFL------AIIFPFFGPINSTVGSLLVSFTVYIIPALAHIF 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 82/374 (22%)
LAX2NP_179701.1 PLN03074 2..461 CDD:215559 84/379 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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