DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polyph and slc38a8

DIOPT Version :10

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_012816686.1 Gene:slc38a8 / 733502 XenbaseID:XB-GENE-5766974 Length:448 Species:Xenopus tropicalis


Alignment Length:459 Identity:92/459 - (20%)
Similarity:180/459 - (39%) Gaps:93/459 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LTNCDAFISLLKCVIGTGILAMPLAFRCSG----FVMGTVMSILLMI----LLTYSIHL------ 96
            |::..|...:||..:|.|:|..|.||...|    .:|..::|::.:|    :|.|:..|      
 Frog    32 LSSMGAIFIMLKSALGAGLLNFPWAFNKVGGMHTAIMVELVSLIFLISGLVILGYASSLSKHSTY 96

  Fly    97 --LIADMTECCRRRRVPQVSMPEAVRIAYEEGPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVF 159
              ::.|:   |                    ||    ..|:..|.   |.:: ..|::|..:|..
 Frog    97 QGVVKDL---C--------------------GP----AIGKLCGI---CYII-NLFMICVAFLRV 130

  Fly   160 VSKNFKEIGDH-----------------YIERYNERYYVLVACL-LLLPLFMIRRL---KYLVPL 203
            |....:::.|.                 |::   .|:.:.|.|| ::|||.:.:.:   ||...|
 Frog   131 VEDQLEKLCDSIHSNNTLYAMSEVSQSWYMD---PRFAITVLCLVIILPLSIPKEISFQKYTSIL 192

  Fly   204 NLISNFLLYAGFALIMYYLFNGLPNINDREMVTPPVEWIEFIAIA---AFSLTAVGSMLVVEAHM 265
            ..::...|.. ..:|.||:... |.:...|..:....|....::.   .|......:.:.:.:.|
 Frog   193 GTLAACYLTV-MIIIKYYVMEH-PVLIKHEFSSNAASWASMFSVVPTICFGFQCHEACVTIYSSM 255

  Fly   266 AHPQSYLGLFGVLNLAVLFILLSNMFFGIIGYWRFGDNVHASITLNIPQDEILSQFIKVFIASGI 330
            .: :.......|..:::|..||...|.||.|...||:.|.|.|.::.|.:::.....::.....|
 Frog   256 KN-KCLSNWAAVSVVSMLICLLIYSFTGIYGSLTFGEAVAADILMSYPGNDVAVIIARLLFTISI 319

  Fly   331 FLSYPLNGFVVITVMFSDYENSEPRGRYRTL-----IEYVVRLLFLFLTGAVAIGVPNLAALTEL 390
            ...||:...:...|:...:.|...:..:.||     :..|:.:|::.:|..:|:.||:::.:..:
 Frog   320 ITIYPIILLLGRCVIQEAWLNHREKSLFVTLTYERCVRVVITVLWILVTLLIALFVPDISEVISV 384

  Fly   391 EGA------FSLSNLNLLCPALIDVFLNYNVGYGRLMWKLIRDILLILIGLIFGIVGCTVALMQL 449
            .|.      |....|.|:| |:....:|.........|..|.   ::....:|| ...|:|:|::
 Frog   385 IGGISAFFIFIFPGLCLVC-AVESEPMNTKAKSCLTAWGAIS---VVCGAFVFG-QSTTIAVMEI 444

  Fly   450 IRDF 453
            |..|
 Frog   445 IAKF 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:444915 81/407 (20%)
slc38a8XP_012816686.1 SLC5-6-like_sbd 37..442 CDD:444915 88/446 (20%)

Return to query results.
Submit another query.