DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and Slc38a6

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001032806.2 Gene:Slc38a6 / 625098 MGIID:3648156 Length:457 Species:Mus musculus


Alignment Length:490 Identity:100/490 - (20%)
Similarity:197/490 - (40%) Gaps:100/490 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DQAPNRDD--PDLQTEPLTIAQSITSFYMYNPYEKRSVEVPLTNCDAFISLLKCVIGTGILAMPL 69
            ::|...|:  |.|..||.....|..||.:                 :..:::..::|:|||.:..
Mouse    22 EEAVAADEWSPLLSNEPHRQGSSGASFGL-----------------SVFNVMNAIMGSGILGLAY 69

  Fly    70 AFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAVRIAYEEGPKWINCFG 134
            ....:|.:..:.:.:.:.:|.:||:|||:|    .|....|          .:||:       .|
Mouse    70 VMANTGILGFSFLLLFVALLASYSVHLLLA----MCIHTAV----------TSYED-------LG 113

  Fly   135 RAAGFMTTCVLVFGQFLLCTV-----YLVFVSKNFKEI------GDH----YIERYNERYYVLVA 184
            ..|..:...|:|.|..::..:     ||:.:.......      .||    |::  .:...:::.
Mouse   114 LFAFGLPGKVVVAGTIIIQNIGAMSSYLLIIKTELPAAISEFLPSDHSGSWYLD--GQMLLIIIC 176

  Fly   185 CLLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMYYLFNGLP------NINDREMVT------- 236
            ..::.||.::.::.:|...:.:| |.....|||::......:|      .||:...::       
Mouse   177 VGIVFPLSLLPKIGFLGYTSSLS-FFFMVFFALVVVIKKWAVPCPVTLDCINEVFQISNATDDCK 240

  Fly   237 PPV-----EWIEFIAIAAFSLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAVLFILLSNMFFGIIG 296
            |.:     |.:..|...|||.....|:|.:...:..| |...:..|.|.|:....|......:.|
Mouse   241 PKLFHFSKESVYAIPTMAFSFLCHTSVLPIYCELQSP-SKKRMQNVTNTAIALSFLVYFVSALFG 304

  Fly   297 YWRFGDNVHASI----TLNIPQDEILSQFIKVFIASGIFLSYPLNGF----VVITVMFSDYENSE 353
            |..|.|.|.:.:    :..:|.| ::...:|:.|...:.|:.||..|    .::.::||:|..|.
Mouse   305 YLTFYDKVESELLQGYSKYLPHD-VIVMAVKLCILFAVLLTAPLIHFPARKALMMILFSNYPFSW 368

  Fly   354 PRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNVGYG 418
            .|   .:|....:..:.:.|    ||.||::..:..:.||.:.:.|..:.|.|..:.|:..   .
Mouse   369 IR---HSLTTAALNAIIVVL----AIYVPDIRNVFGVVGASTSTCLIFVFPGLFYLKLSRE---D 423

  Fly   419 RLMWKLIRDILLILIGLIFGIVGCTVALMQLIRDF 453
            .|.||.:..:.|:|.|.:.|    :.:|:.:|.|:
Mouse   424 FLSWKKLGALFLLLTGAVVG----SFSLVLIIFDW 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 79/397 (20%)
Slc38a6NP_001032806.2 SdaC 45..452 CDD:223884 91/463 (20%)
SLC5-6-like_sbd 45..452 CDD:294310 91/463 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848951
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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