DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polyph and slc38a9

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001073468.1 Gene:slc38a9 / 562137 ZFINID:ZDB-GENE-061013-597 Length:549 Species:Danio rerio


Alignment Length:506 Identity:102/506 - (20%)
Similarity:197/506 - (38%) Gaps:122/506 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LQTEPLTIAQSITSFYMYNP----YEKRSVEVPLTNCD--AFISLLKCVIGTGILAMPLAFRCSG 75
            |...|..:..|....|:|:|    ::.:..:.|:.|..  ...::...::||.||::|...:.:|
Zfish    70 LLAPPDHVIPSHEDIYIYSPLGTAFKVQGGDSPIKNPSIVTIFAIWNTMMGTSILSIPWGIKQAG 134

  Fly    76 FVMGTVMSILLMILLTYSIHLLIADMTECCRR-----RRVPQV-----SMPEAVRIAYEEGPKW- 129
            |.:|.::.:|:.:|..|           ||.|     :.:|.|     ..|:..:..:....|| 
Zfish   135 FTLGIIIIVLMGLLTLY-----------CCYRVLKSTKSIPYVDTSDWEFPDVCKYYFGGFGKWS 188

  Fly   130 ------INCFGRAAGF---MTTCVLVFGQFLLCTVYLVFVSKNFKEIG----------------- 168
                  ::..|....:   |:..:...|:|:...|:.|..|..|...|                 
Zfish   189 SLVFSLVSLIGAMVVYWVLMSNFLFNTGKFIFNYVHNVNTSDAFGTNGTERVICPYPDVDPHGNS 253

  Fly   169 ----------------DHYIERYNERYYVLVACLLLLPLFMIR------RLKYLVPLNLISNFLL 211
                            ||:..:.|...:.|:  ||||||...|      |..:|..:::|  :|:
Zfish   254 STSLYSGSDNSTGLEFDHWWSKTNTIPFYLI--LLLLPLLNFRSASFFARFTFLGTISVI--YLI 314

  Fly   212 Y--------AGFALIMYYLFNGLPNINDREMVTPPVEWIEFIAIAAFSLTAVGSMLVVEAHMAHP 268
            :        .||.|..::..:.:..:.:...:.|.:..:  :.:|.|....:.:::....|..: 
Zfish   315 FLVTYKAIQLGFHLEFHWFDSSMFFVPEFRTLFPQLSGV--LTLAFFIHNCIITLMKNNKHQEN- 376

  Fly   269 QSYLGLFGV--LNLAVLFILLSNMFFGIIGYWRF------GDNVHASITLNIPQDEILSQFIKVF 325
                   .|  |:||.|.:.|:.::.|::.:..|      .:.:..:...|.|..:||....:.|
Zfish   377 -------NVRDLSLAYLLVGLTYLYVGVLIFAAFPSPPLSKECIEPNFLDNFPSSDILVFVARTF 434

  Fly   326 IASGIFLSYPLNGFVV-ITVMFSDYENSEPRGRYRTLIEYVVRLLFLFLTGA---VAIGVPNLAA 386
            :...:...|||.|::| :.:|...:.|..|...:       |.:|.:|:.||   :|...||:.:
Zfish   435 LLFQMTTVYPLLGYLVRVQLMGQIFGNHYPGFLH-------VFVLNVFVVGAGVLMARFYPNIGS 492

  Fly   387 LTELEGAFSLSNLNLLCPALID-VFLNYNVGYGRLMW-KLIRDILLILIGL 435
            :....||.....|..:.|:||. |.|...   |.|.| ..:....|||:|:
Zfish   493 IIRYSGALCGLALVFVLPSLIHMVSLKRR---GELRWTSTLFHGFLILLGV 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 83/437 (19%)
slc38a9NP_001073468.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SdaC 100..549 CDD:223884 96/476 (20%)
SLC5-6-like_sbd 110..538 CDD:294310 92/462 (20%)
Important for arginine binding and amino acid transport. /evidence=ECO:0000269|PubMed:29872228 117..122 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594590
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.