DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polyph and slc38a5b

DIOPT Version :10

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001002648.1 Gene:slc38a5b / 436921 ZFINID:ZDB-GENE-040718-395 Length:472 Species:Danio rerio


Alignment Length:461 Identity:92/461 - (19%)
Similarity:172/461 - (37%) Gaps:119/461 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EPKSQDQ-APNRDDPDLQTEPLTIAQSITSFYMYNPYEKRSVEVPLTNCDAFISLLKCVIGTGIL 65
            ||..::: .|::.|.. :|...|..:..|||.|                 :..:|...::|:|||
Zfish    21 EPTEREEFLPHKSDGG-KTPQFTDFEGKTSFGM-----------------SVFNLSNAIMGSGIL 67

  Fly    66 AMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAVRIAYEEGPKWI 130
            .:..|...:|.|:..|:...:.:|.:||:|||:         |....|.:.     |||:..|  
Zfish    68 GLSYAMSNTGIVLFLVLLTCIAVLSSYSVHLLL---------RSAGVVGIR-----AYEQLGK-- 116

  Fly   131 NCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEI-----------GDHYIERYNERYYVLVA 184
            ..||.....:...|:........:.||..|......:           |:.::   |..|.:::.
Zfish   117 RAFGHPGKILAAVVITMHNIGAMSSYLFIVKYELPLVIQAFLGLQHSSGEWFL---NGNYLIIIV 178

  Fly   185 CL-LLLPLFMIRRLKYLVPLNLISNFLLYAGFAL---------IMYYLFNGLP------------ 227
            .: ::|||.::|:|.||.         ..:||:|         ::|..|| :|            
Zfish   179 SISIILPLALMRQLGYLG---------YTSGFSLTCMVFFLISVIYKKFN-IPCPFEDFSNHTVV 233

  Fly   228 ---------------NINDREMVTPPVEWIEFIAIAAFSLTAVGSMLVVEAHMAHPQSYLGLFGV 277
                           .||.:...|.|        |.||:......:|.:...:.:| :...:..:
Zfish   234 SNISIIEGECEAKFFTINQQTAYTVP--------ILAFAFVCHPEVLPIYTELRNP-TKRRMQAI 289

  Fly   278 LNLAVLFILLSNMFFGIIGYWRFGDNVHASITLNIPQDEILSQFI---KVFIASGIFLSYPLNGF 339
            .|:::|.:.:..:...|.||..|..|..|.:.....:.:.|...|   :|.:...:.|:.|:..|
Zfish   290 ANVSILGMFVMYLLTAIFGYLTFYLNTEAELLHTYSKVDPLDTLILCVRVAVLVAVTLTVPVVLF 354

  Fly   340 ----VVITVMFSDYENSEPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLN 400
                .::.::|       |...:.......:.|..||:...:.|.|||:..:..:.||.|..:|.
Zfish   355 PIRRALLQLLF-------PEKPFHWARHISIALCLLFVVNLLVIFVPNIRDIFGIIGATSAPSLI 412

  Fly   401 LLCPAL 406
            .:.|.|
Zfish   413 FILPGL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:444915 82/412 (20%)
slc38a5bNP_001002648.1 SLC5-6-like_sbd 46..457 CDD:444915 86/435 (20%)

Return to query results.
Submit another query.