DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and avt5

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_595211.1 Gene:avt5 / 2540081 PomBaseID:SPBC1685.07c Length:420 Species:Schizosaccharomyces pombe


Alignment Length:427 Identity:82/427 - (19%)
Similarity:156/427 - (36%) Gaps:97/427 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YNPYEKRSVEVPLTNCDAF---ISLLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIH 95
            |:|......:|.:.....|   |:|...::|.|||::|.||..:|.:.|    .|.::...::..
pombe     4 YSPLSSGPADVHIGKAGFFSSVINLANTILGAGILSLPNAFTKTGLLFG----CLTIVFSAFASF 64

  Fly    96 LLIADMTECCRR-------------RRVPQVSMPEAVRIAYEEGPKWINCFGRAAGFMTTCVLVF 147
            |.:..:::|..|             ...|.:::.....||       :.|||.|..         
pombe    65 LGLYFVSQCAARLPRGKASFAAVAKHTFPSLAVVFDASIA-------VKCFGVAVS--------- 113

  Fly   148 GQFLLCTVYLVFVSKNFKEIGDH-------YIERYNERYYVLVACLLLLPLFMIRRLKYLVPLNL 205
                    |||.|.....:|...       ::.|   :.:::.|..:|.||..::||..|...::
pombe   114 --------YLVIVGDLMPQIAPSLGLSSPMFLRR---QTWIVFALFVLTPLSFLKRLDSLRHTSV 167

  Fly   206 ISNFLLYAGFALIMYYLFNGLPNINDREMVTPPVEWIEFIAIAAFSLTAVGSMLVVEAHMAHPQS 270
            ||...|.....:::|:...|       :.|...:.:  |:..:.|...:|..:.|. ....|..:
pombe   168 ISLIALCYLVFIVLYHFIIG-------DTVKGEIRY--FVPESGFGYLSVLPVFVF-GFTCHQNA 222

  Fly   271 YLGLFGVLN---------------LAVLFILLSNMFFGIIGYWRFGDNVHASITLNIPQDEILSQ 320
                |.|:|               .|::...|..:...|.||..||.....:|........|...
pombe   223 ----FSVINEVRNFSQGFVNFTMFTAIISSTLLYLLVAITGYLSFGSLASGNIIAMYDNTSIWII 283

  Fly   321 FIKVFIASGIFLSYPL-------NGFVVITVMFSDYENSEPRGRYRTLIEYVVRLLFLFLTGAVA 378
            ..|:.|...:..||||       :.:..|...:|.::.|:   .|..    |:.|..|..|.::|
pombe   284 GGKLAIVVLVLFSYPLQCHPCRNSVYQAIRRSYSAHDMSD---GYHA----VITLCILLFTHSLA 341

  Fly   379 IGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNV 415
            :.:.:|..:....|:...:.::.:.|..:..|.::.|
pombe   342 LLLSSLEMVLAFVGSTGSTFISFILPGSLYYFFSHKV 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 77/401 (19%)
avt5NP_595211.1 SdaC 11..418 CDD:223884 80/420 (19%)
SLC5-6-like_sbd 17..409 CDD:294310 79/414 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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