DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polyph and Slc36a4

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_758493.2 Gene:Slc36a4 / 234967 MGIID:2442595 Length:500 Species:Mus musculus


Alignment Length:427 Identity:114/427 - (26%)
Similarity:211/427 - (49%) Gaps:45/427 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ISLLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPE 117
            :.|||..||||:|.:|||.:.:|.|:|.:..:.:.|:..:.:|:|:......|:|.:...:...:
Mouse    63 VHLLKGNIGTGLLGLPLAIKNAGIVLGPISLVFIGIISVHCMHILVRCSHFLCQRFKKSTLGYSD 127

  Fly   118 AVRIAYEEGPKWINCFGRAAGFMTTCV---LVFGQFLLCTVYLVFVSKNFKEIGD---------- 169
            .|..|.|..| | :|..|.|.:..:.|   ||..|...|:||:||:::|.|::.:          
Mouse   128 TVSFAMEASP-W-SCLQRQAAWGRSVVDFFLVITQLGFCSVYIVFLAENVKQVHEGFLGSTPIVS 190

  Fly   170 ------HYIER--YNERYYVLVACLLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMYYLFNGL 226
                  |..||  .:.|.|:|....|::.|..||.||.|..|:.::|..:.|...:|..|:...:
Mouse   191 NGSDLSHACERRSVDLRVYMLCFLPLIILLVFIRELKNLFVLSFLANISMAASLVIIYQYVVRNM 255

  Fly   227 PNINDREMVTPPVEWIEFIAIAAFSLTAVGSMLVVEAHMAH----PQSYLGLFGVLNLAVLFILL 287
            |:.::..:|....::..|...|.|:...:|.:|.:|..|..    ||:       ||:.:..:.:
Mouse   256 PDPHNLPIVAGWKKYPLFFGTAVFAFEGIGVVLPLENQMRESKRFPQA-------LNIGMAIVTV 313

  Fly   288 SNMFFGIIGYWRFGDNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYENS 352
            ..:....:||..|.|.:..|||||:|||..|.|.:|:..:.|||::|.:..:|...::.... .:
Mouse   314 LYISLATLGYMCFRDEIKGSITLNLPQDMWLYQSVKILYSFGIFVTYSIQFYVPAEIIIPGV-TA 377

  Fly   353 EPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVFL----NY 413
            ....:::.:.|:.:|.|.:.:|.|.||.:|.|..:....||.|.|.|.|:.|.|:::..    :|
Mouse   378 RLHAKWKRICEFGIRSLLVSITCAGAILIPRLDIVISFVGAVSSSTLALILPPLVEILTFSKDHY 442

  Fly   414 NVGYGRLMWKLIRDILLILIGLIFGIVGCTVALMQLI 450
            |:      |.::::|.:...|::..::|..|.:.::|
Mouse   443 NI------WMILKNISIAFTGVVGFLLGTYVTVEEII 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 105/378 (28%)
Slc36a4NP_758493.2 SLC5-6-like_sbd 54..469 CDD:294310 113/421 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848990
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

Return to query results.
Submit another query.