DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and Slc38a5

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_008771290.2 Gene:Slc38a5 / 192208 RGDID:620702 Length:479 Species:Rattus norvegicus


Alignment Length:499 Identity:100/499 - (20%)
Similarity:191/499 - (38%) Gaps:142/499 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PKSQDQAPNRDDPDLQTEPLTIA--QSITSFYMYNPYEKRSVEVPLTNCDAFISLLKCVIGTGIL 65
            |.:...||.|       :|:...  :..|||.|                 :..:|...::|:|||
  Rat    37 PTTHGPAPGR-------KPVQFLDFEGKTSFGM-----------------SVFNLSNAIMGSGIL 77

  Fly    66 AMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAVRI-AYEE-GPK 128
            .:..|...:|.:....:.:.:.:|.:||||||:.    |.           ..|.| |||: |.:
  Rat    78 GLAYAMAHTGVIFFLALLLCIALLSSYSIHLLLT----CA-----------SVVGIRAYEQLGQR 127

  Fly   129 WINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEI----------GDHYIERYNERYYVLV 183
               .||.|...:...::........:.||..:......:          ||.:::  .....:||
  Rat   128 ---AFGPAGKVVVAIIICLHNVGAMSSYLFIIKSELPLVIGTFLHMDPEGDWFLK--GNLLIILV 187

  Fly   184 ACLLLLPLFMIRRLKYL-----VPLNLISNFL---LYAGFALIMYYLFNGLPNINDREMVTPPVE 240
            :.|::|||.:::.|.||     :.|..:..||   :|..|.|      ..:.:.||..:.:.|. 
  Rat   188 SLLIILPLALMKHLGYLGYTSSLSLTCMLFFLISVIYKKFQL------GCVVSHNDTVVESEPA- 245

  Fly   241 WIEFIAIAAFSLTAVGSMLVVEAHMA------------HPQSYLGLF------------GVLNLA 281
                 .:.||:.:....:..|::.|:            ||: .|.::            .|.|::
  Rat   246 -----PLQAFNSSCEAKLFTVDSQMSYTVPIMAFAFVCHPE-VLPIYTELCCPTQRRMQAVANMS 304

  Fly   282 V--LFILLSNMFFGI---IGYWRFGDNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGF-- 339
            :  :||:     :|:   .||..|...|.|.:.....|:::|...:::.:...:.|:.|:..|  
  Rat   305 IGAMFIM-----YGLTATFGYLTFYSTVKAEMLEMYTQEDLLILCVRLAVLLAVTLTVPVVLFPI 364

  Fly   340 --VVITVMFSDYENSEPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLL 402
              .:..::|.....|.||       ...:.|:.|.|...:.|.||.:..:....|:.|       
  Rat   365 RRALQQLLFPSKAFSWPR-------HVAIALILLILVNILVICVPTIRDIFGFIGSTS------- 415

  Fly   403 CPALIDVFLNYNVGYGRLM---------WKLIRDILLILIGLIF 437
            .|:||  |:..:|.|.|::         |..|:.:...::|::|
  Rat   416 APSLI--FILPSVFYLRIVPADMEPLFSWPKIQALCFGVLGVLF 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 81/409 (20%)
Slc38a5XP_008771290.2 SLC5-6-like_sbd 56..466 CDD:382020 95/473 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352641
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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