DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and R02F2.8

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_498173.1 Gene:R02F2.8 / 187530 WormBaseID:WBGene00019837 Length:494 Species:Caenorhabditis elegans


Alignment Length:441 Identity:84/441 - (19%)
Similarity:163/441 - (36%) Gaps:102/441 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAVRIAYEE 125
            |.|::|:..|....|.:.|.   |||.:...:|::..:    |.|...::.|...||     |.:
 Worm    39 GGGMIALSYALTSMGLIPGL---ILLSLCSIFSLYTAL----ELCWTWKIMQNRWPE-----YRD 91

  Fly   126 ------GPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHYIE-RYNERYYVLV 183
                  |.......||........::...|....||.::..:||...:...:.. ..|:.|.:|:
 Worm    92 HCRKPYGEMAYRTIGRKMRSFIAFMICITQIGFATVLVLLAAKNLSILLHFFFSLDINQCYLILI 156

  Fly   184 ACLLLLPLFMIRRLKYLVPLNLISNFLLYAGFA-----LIMYYLFNGLPNINDREMVTPPVEWIE 243
            ..|.:.|..|:..     |::.....|..||.:     |::..|.:..|..........|.....
 Worm   157 VGLAVWPATMLPS-----PMHFWQAALFSAGSSTCAVILVVVGLAHDAPVCAQDAPHEEPNLLKA 216

  Fly   244 FIAIAAF--------SLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAVLFILLSNMFFGIIGYWRF 300
            |:|...|        :|..:...:...||..|.         :.||::|..:..|...:.||:.:
 Worm   217 FMAFGTFVFAFGGHATLPTIQHDMKKPAHFVHS---------VVLAIIFCTMLYMCIAVGGYFVY 272

  Fly   301 GDNVHASITLNIPQDEI--LSQFIKVFIASGIFLSYPLNGFVVITVMFSDYENSEPRGRYRTLIE 363
            |..|..:|   ||..:|  :.|.:.:.||..:..:       ::.||      |.|..:...|::
 Worm   273 GSTVGEAI---IPSLQIKWIQQTVNLMIAVHVITT-------IVIVM------SPPIQQVEQLLK 321

  Fly   364 ---------YVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNVGYGR 419
                     ::||.:..:....:.:.:|:...:.:|.||.::..:.|:.|.:..:    ::....
 Worm   322 VPHKFGVKRFLVRSILFWFVIFIGLSIPHFGPVLDLIGASTMVLMTLILPPIFYL----SIRTQE 382

  Fly   420 LMW-----------------------KLIRDILLILIG--LIFGIVGCTVA 445
            ::|                       :|...::|.|..  |||||:|.|::
 Worm   383 IIWLQGNEKSDAAEPTHERATFKEILRLTPKLILALNAAVLIFGIIGGTLS 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 73/376 (19%)
R02F2.8NP_498173.1 Aa_trans 22..416 CDD:279788 75/422 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166185
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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