DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and slc-36.4

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_492453.1 Gene:slc-36.4 / 186798 WormBaseID:WBGene00010421 Length:481 Species:Caenorhabditis elegans


Alignment Length:474 Identity:111/474 - (23%)
Similarity:204/474 - (43%) Gaps:73/474 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DLQTEPLTIA----------QSITSFYMYN----PYEKRSV-------EVPLTNCDAFISLLKCV 59
            :|:|.|..:.          |...|....|    |.:.:||       :..::.....|:.:..:
 Worm    12 ELETMPFIVGPTDNGQERKQQEFDSMGAKNDRDRPNDTKSVISTLIARKTGISATSGLINFICGM 76

  Fly    60 IGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAVRIAYE 124
            ||.|..::.::|:.:|...|..:..::..|..||:|.::.......:......:...|....|.:
 Worm    77 IGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQYLAKSNGDQSLDYGEMAEAAMQ 141

  Fly   125 EGPKWINCFGRAAGF-MTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHYIER---YNERYYVLVAC 185
            ...||....|:.|.. :..|:|.| |..:.||::||..::..||.:.:.:.   :::       |
 Worm   142 NSYKWARKHGKLAKIVINACLLAF-QLGVITVFMVFAVEHVIEIWEFFADSPPPFSK-------C 198

  Fly   186 LLLLPLFM-------IRRLKYLVPLNLISNFLLYAGFALIMYYLFNGLPNINDREMVT------- 236
            :::|..|:       |..:|.|..|.|..|.:::|...||            .:|::.       
 Worm   199 VMILMYFVPQMLLNFIGHMKLLTILCLFGNVIIFAAIVLI------------TKELMVHTWYPTW 251

  Fly   237 --PPVEWIEFIAIAA----FSLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAVLFILLSNMFFGII 295
              ..|..||.|::||    :|......:|.:|..:.:|:...|..|||:.|:..:.:...|.|..
 Worm   252 ELGSVTGIEGISLAAGALIYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFF 316

  Fly   296 GYWRFGDNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYEN--SEPRGRY 358
            ||..||..|..|:|||:| :.||:..||..:...||....:..:|::.::.....:  ||.|...
 Worm   317 GYVTFGPAVQGSLTLNLP-NSILTVSIKGLLVLKIFFGSAIQLYVIVQMLLPSLRSKISEDRKMV 380

  Fly   359 RTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALID--VFLNYNVGYG--- 418
            ..|:.|.:||..:.::..:|:.||||..:..|.|..|...::|:.|:.:|  |||......|   
 Worm   381 HRLLPYALRLGLMLISLCIALIVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKKQGDMF 445

  Fly   419 RLMWKLIRDILLILIGLIF 437
            :...|||.::.|.::|..|
 Worm   446 KFYQKLIINVFLFVLGWFF 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 91/382 (24%)
slc-36.4NP_492453.1 Aa_trans 62..471 CDD:279788 102/424 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166153
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.820

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