DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and F13H10.3

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_741487.1 Gene:F13H10.3 / 177997 WormBaseID:WBGene00008774 Length:617 Species:Caenorhabditis elegans


Alignment Length:549 Identity:101/549 - (18%)
Similarity:190/549 - (34%) Gaps:166/549 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NRDDPD----LQTEPLTIAQSITSFYMYNPYEK-RSVEVPLTNCDAFISLLKCVIGTGILAMPLA 70
            ||.||.    |||.|..:..  .:.:...|:|: :.|.....:.....|:...::||.:||||.|
 Worm   127 NRLDPGGEHLLQTMPDHVLP--PNLFSILPFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWA 189

  Fly    71 FRCSGFVMGTVMSILLMILLTYSIHL---------------LIADMTECCRRRRVPQVSMPEAVR 120
            .:.:|.|:|.::.:.:..:..|:.::               |:|:.::.|:              
 Worm   190 LQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRLQDLSVDPLLAEFSDVCK-------------- 240

  Fly   121 IAYEEGPKWINCFGR----AAGFMTTCVLVFG---------QFLLCTVYLVFVS----------- 161
                      :.|||    .|...:.|||:.|         .||..|..:|:.|           
 Worm   241 ----------SLFGRIGEYCAVVFSVCVLIGGVIVYWVLMSNFLYYTGAVVYESMQPNSTTIPVM 295

  Fly   162 --KNF-------KEIGDHYIERYNERYYVLVA----------------------------CLLLL 189
              |.|       ::.....|.::.::.|..|:                            ...|.
 Worm   296 ENKTFTCDVYCPEQTSQWTIPQWEKQLYDAVSEMEGGETGDDSWSFDKFWTLRGTVPIYLAFALF 360

  Fly   190 PLFMIRRLKYLVPLNLISNFLLYAGFALIMY---YLFNGLPNINDREMVTPPVEWIEFIAIAAFS 251
            ||...:...:....|::       |...:||   ::|:.|.........:.| :.|.::.:|...
 Worm   361 PLMNFKSPTFFTKFNVL-------GTISVMYLLMFVFSKLLECGVNMDFSNP-KSIHYVQLANMH 417

  Fly   252 LTAV-----------GSMLVVEAHMAHPQSY---LGLFGVLNLAVLFILLSNMFFGIIGYWR--F 300
            ..|:           .::|.:..:..||::.   |.: |...:|..::.:...||......|  .
 Worm   418 FPALSGTLTLSYFIHNAVLTILRNQKHPENNARDLSI-GYCLVAFCYVFIGFTFFAAFPVQRSCI 481

  Fly   301 GDNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYENSEPRGRYRTLIEYV 365
            .||    ...|....::||...::|:...:....||..|:|.:.:|.........|..|.:|..|
 Worm   482 SDN----FLNNFGAGDVLSSTARLFLLFQMITVLPLLMFLVRSQLFYAIFGQTWPGAIRVIILNV 542

  Fly   366 VRLLFLFLTGAVAIG----VPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNVGYGRL--MWKL 424
            :.:       |||:|    .||:.::....|:.|........||:  |::..:...|.|  |.|.
 Worm   543 LLI-------AVAVGFATFYPNVGSILRYVGSISGLVYVFALPAM--VYIKQSEAAGTLTPMKKY 598

  Fly   425 IRDILLILIGLIFGIVGCTVALMQLIRDF 453
            ..          :||:  .:.:..||..|
 Worm   599 AH----------YGII--VIGVANLIAQF 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 80/455 (18%)
F13H10.3NP_741487.1 SdaC 170..615 CDD:223884 89/502 (18%)
SLC5-6-like_sbd 170..613 CDD:294310 88/500 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166201
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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