DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polyph and slc-36.5

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001022026.1 Gene:slc-36.5 / 174125 WormBaseID:WBGene00016628 Length:489 Species:Caenorhabditis elegans


Alignment Length:431 Identity:105/431 - (24%)
Similarity:198/431 - (45%) Gaps:54/431 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AFISLLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSM 115
            |.|:|:|.::|.|..::||||:.||:|.|    ::::::|.:...|.:..:.:|.........|.
 Worm    81 ALINLMKGMLGAGCFSVPLAFKQSGYVSG----LVIIVVLGFLCALCMIKLVKCAGYLSKVNQSA 141

  Fly   116 P--------EAVRIAYEEGPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHYI 172
            |        :|.:.:|....| :....||....:.|:|..|   :|..:.:||..:..|:.:..:
 Worm   142 PLDYGNMAYKATQASYTPIRK-LAPVSRALVNSSLCILQLG---ICCCFYIFVVYHLHELLEFVM 202

  Fly   173 ERYNERY----YVLVACLLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMYYLFNGLPNINDRE 233
            .....|.    .||.|.:||:.|..:|.|. ||.|.  .|||:....|:||:.|   |...:.:.
 Worm   203 NDVPSRATLFPMVLPAFILLVSLSSMRALS-LVSLG--GNFLMLIALAVIMFQL---LTTEHKKL 261

  Fly   234 MVTPPVEWIEFIAIAA----FSLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAVLFILLSNMFFGI 294
            ...|||..:..|..||    ::|.....:|.:|..|..|:...|.||||::.|..:::...|.|.
 Worm   262 ADLPPVTDLMGIVSAAGTILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGF 326

  Fly   295 IGYWRFGDNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYENSEPRGRYR 359
            .|:..:|::|..|||||:|.|. |..|:|..:...::..:.:..|.::.:::...:.     :.|
 Worm   327 FGFLTYGNDVQDSITLNLPNDH-LGIFVKAVLLFVVYSGFLIQVFPIVAMIWPAIKK-----KLR 385

  Fly   360 T----------LIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALID--VFL- 411
            |          ::.:..|...:.:...::..:|.|:.:..|.|..:...|.|:.|:|..  :|| 
 Worm   386 TTCGVSTTTKRIVHFAFRYSIVIVVFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSLFHLLIFLP 450

  Fly   412 --NYNVGYGRLMWKLIRDILLILIGLIFGIVGCTVALMQLI 450
              ...:|:   ::.:..|.:.|::|:.|.|.|....:..|:
 Worm   451 QFECRIGF---LFDIFLDFVCIILGMFFVIYGSITHVQHLM 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 94/381 (25%)
slc-36.5NP_001022026.1 SLC5-6-like_sbd 75..481 CDD:382020 104/422 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

Return to query results.
Submit another query.