DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and slc-36.2

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001040812.1 Gene:slc-36.2 / 173442 WormBaseID:WBGene00020837 Length:449 Species:Caenorhabditis elegans


Alignment Length:428 Identity:121/428 - (28%)
Similarity:202/428 - (47%) Gaps:30/428 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EKRSVEVPLTNCDAFISLLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMT 102
            :.||:    |...|.|.::|.::|||:|::||||:.||..:|.::...:.::..|....||....
 Worm    35 DSRSI----TADQALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTRQLIFGQH 95

  Fly   103 ECCRRRRVPQVSMPEAVRIAYEEGPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEI 167
            .....:|..::.....:|.|.|.||.||...|.....|....:...||..|.||.||::.|.|:.
 Worm    96 YITFIKREQRMDYANVMRSAVELGPAWIRGHGYLFKQMVNINMFVAQFGFCCVYFVFMADNLKQF 160

  Fly   168 GDHYIERYNERYYVLVA---CLLLLP---LFMIRRLKYLVPLNLISNFLLYAGFALIMYYLF--- 223
            .|.     ....::..|   .|||:|   |..||.||.|.||..::||:......:::..||   
 Worm   161 FDQ-----TSSIHISQAGWIALLLIPISALCTIRELKALAPLAAVANFVYIIAVVIVLADLFSDW 220

  Fly   224 ---NGLPNINDREMVTPPVEWIEFIAIAAFSLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAVLFI 285
               :.||.....|.:  |:    |.....|:...|..:|.:|..|..|..::...||||.:.:.:
 Worm   221 QPLDSLPAFGAVENL--PL----FFGTVMFAFEGVAVVLPIENQMNEPIHFITPNGVLNTSCILV 279

  Fly   286 LLSNMFFGIIGYWRFGDNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYE 350
            ||..|..|..|:.|:|:::..::|||:||.... |.|||.....|.:||||..:|.:..:....:
 Worm   280 LLVYMTVGFFGFLRYGNDIKDTLTLNLPQTPFY-QAIKVMFVLCILVSYPLQFYVPMERVEKWIK 343

  Fly   351 NSEPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNV 415
            ......:...:| |.:|...:.||.|:|..:|:||....|.|:.:.::|.|:.|.||::..:|: 
 Worm   344 RKVVEAKQEPMI-YAIRFGGVLLTCAMAQLIPHLALFISLVGSVAGTSLTLVFPPLIELLCSYS- 406

  Fly   416 GYGRLMWKLIRDILLILIGLIFGIVGCTVALMQLIRDF 453
            ......|..||:|.|:...::....|...:::|:|..|
 Worm   407 KQELTKWVWIRNIGLMAFAMVGFTTGTYASMVQIIEAF 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 106/368 (29%)
slc-36.2NP_001040812.1 SLC5-6-like_sbd 37..441 CDD:382020 119/421 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166174
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.960

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