DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and Y18D10A.23

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_493251.1 Gene:Y18D10A.23 / 173155 WormBaseID:WBGene00012487 Length:503 Species:Caenorhabditis elegans


Alignment Length:445 Identity:98/445 - (22%)
Similarity:181/445 - (40%) Gaps:96/445 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AFISLLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTEC----------- 104
            |.:.::..::|.|::::|||...||.:.|.|:.:|..|...|: .:.:.:..|.           
 Worm    44 AAVFIVGDMMGAGMISLPLALGRSGLIAGCVLILLASIFSGYT-GIQLGENWEMMQIRWPKYRTH 107

  Fly   105 CRRRRVPQVSMPEAVRIAYEEGPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGD 169
            |||      ..||   :||.....|      |...:..| ||..|||:..|.|:..::||..:.:
 Worm   108 CRR------PYPE---MAYRALGNW------ARQVVAVC-LVVSQFLIACVLLLISAENFTNLLN 156

  Fly   170 HYIERYNERYYVLVA-CLLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMYYLFNGLPN-INDR 232
            .:...:.:....:|| .|:|.|..:::.......|.:||.........||::.....:.: :..|
 Worm   157 TFFHLHLDFCVFIVAIALVLWPFSLLQSPMDFWQLAVISAVSSTIAAGLIVFGASWDMTSCVPYR 221

  Fly   233 EMVTPPVEWIEF---IAIAAFSLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAVL--FILLSNMFF 292
            :|  |.:|..:|   .....|:....|:...::..||.|..:       |.:|:  :||::.::.
 Worm   222 QM--PSLEAKQFTLAYGTIVFAFGGHGAFPTIQHDMAMPHQF-------NKSVISSYILITLVYL 277

  Fly   293 --GIIGYWRFGDNVHASITLNIPQDEI--LSQFIKVFIASGIF---------LSYPLNGFVVITV 344
              .|.|...:||::   |...||..::  ::|.|.:.|.:.|.         ||..:..::.|..
 Worm   278 AVSITGLIAYGDSM---IDTVIPSIQLTWVAQTINILITAHILPTIIIVLSPLSQQVEEWIKIPN 339

  Fly   345 MFSDYENSEPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDV 409
            .|         |..|.|    ||...|||....|:.|..|....:|.||.:::.:.:|.|::..:
 Worm   340 QF---------GCRRVL----VRTFILFLVMFTALSVLKLGLFLDLVGATTITLMTMLLPSIFWL 391

  Fly   410 FLNYN-------VGYGRL--------------MWKLIRDILLIL--IGLIFGIVG 441
            |:..:       :..|.:              :|.....:||..  |.|.||::|
 Worm   392 FMQASAKKREDGLKAGTIQQNSPDVETATLADVWYYTPKLLLAFNCISLTFGLLG 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 88/386 (23%)
Y18D10A.23NP_493251.1 SLC5-6-like_sbd 37..391 CDD:382020 88/388 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166190
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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