DRSC/TRiP Functional Genomics Resources

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Protein Alignment polyph and Slc38a1

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_620187.1 Gene:Slc38a1 / 170567 RGDID:69645 Length:485 Species:Rattus norvegicus


Alignment Length:495 Identity:101/495 - (20%)
Similarity:201/495 - (40%) Gaps:99/495 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PNRDDPDLQTEPLTIAQS--ITSFYMYNPYEKRSVEVPLTN-------CDAFI-----------S 54
            |..|:....:...|..::  |.|.::.:...:||    |||       ||.:|           :
  Rat    19 PEDDNVSNDSNDFTEVENGQINSKFISDRESRRS----LTNSHLEKRKCDEYIPGTTSLGMSVFN 79

  Fly    55 LLKCVIGTGILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAV 119
            |...::|:|||.:..|...:|.::..::...:.:|..|||:||:              :...|..
  Rat    80 LSNAIMGSGILGLAFALANTGILLFLILLTSVTLLSIYSINLLL--------------ICSKETG 130

  Fly   120 RIAYEE-GPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKN-----FKEI-GDHYIERYNE 177
            .:.||: |.:.....|:...|..|.:...|..|   .|| |:.||     .|.: |:.  |.::.
  Rat   131 CMVYEKLGEQVFGTTGKLVIFGATSLQNTGAML---SYL-FIVKNELPSAIKSLMGEE--ETFSA 189

  Fly   178 RY------YVLVACLLLLPLFMIRRLKYL-----VPLNLISNFLLYAGFALIMYYLFNGLPN--- 228
            .|      .|:|...::|||.:::.|.||     ..|:.:..||:...:........||..|   
  Rat   190 WYVDGRVLVVMVTFGIILPLCLLKNLGYLGYTSGFSLSCMVFFLIVVIYKKFQIPCMNGEQNSTV 254

  Fly   229 -INDREMVTPPVEWIEFIAIAAFSLTAVGSMLVVEAHMAHPQSYLGLFG------------VLNL 280
             .|..:..||  :::.|.:...::|..:..     |.:.|| |.|.::.            |.|:
  Rat   255 SANVTDACTP--KYVTFNSKTVYALPTIAF-----AFVCHP-SVLPIYSELKDRSQKKMQMVSNI 311

  Fly   281 AVLFILLSNMFF--GIIGYWRFGDNVHASITLNIPQD--EILSQFIKVFIASGIFLSYPLNGFVV 341
            :  |..:..|:|  .|.||..|.:.|.:.: |:..|.  :||...:::.:...:.|:.|:..|.|
  Rat   312 S--FFAMFVMYFLTAIFGYLTFYEKVQSDL-LHKYQSTGDILILTVRLAVIVAVILTVPVLFFTV 373

  Fly   342 ITVMFSDYENSEPRGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPAL 406
            .:.:|    ....:.::......:|.::.|.:...:.|.:|::..:..:.|..|.:.|..:.|: 
  Rat   374 RSSLF----ELAKKTKFHLCRHVLVTIILLVIINLLVIFIPSMKDIFGVVGVTSANMLIFILPS- 433

  Fly   407 IDVFLNYNVGYGRLMWKLIRDILLILIGLIFGIVGCTVAL 446
             .::|......|....:.|...|.:.:|::|.::...:.:
  Rat   434 -SLYLKITNQDGDKNTQRIWAALFLALGVLFSLISIPLVI 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 84/405 (21%)
Slc38a1NP_620187.1 SLC5-6-like_sbd 69..472 CDD:382020 88/439 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352626
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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