DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polyph and Slc36a1

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_569099.1 Gene:Slc36a1 / 155205 RGDID:619801 Length:475 Species:Rattus norvegicus


Alignment Length:475 Identity:126/475 - (26%)
Similarity:221/475 - (46%) Gaps:44/475 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SQDQAPNRDDPDLQTEPLTIAQS----ITSFYMYNP--YEKRSVEVPLTNCDAFISLLKCVIGTG 63
            |..:..|.|..|..:..::..:|    :.||   :|  |::......:|.....|.|||..||||
  Rat     2 STQRLRNEDYHDYSSTDVSPEESPSEGLGSF---SPGSYQRLGENSSMTWFQTLIHLLKGNIGTG 63

  Fly    64 ILAMPLAFRCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAVRIAYEEGPK 128
            :|.:|||.:.:|.::|.:..:::.|:..:.:.:|:......|||...|.:...:.|....|..|.
  Rat    64 LLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKCAHHLCRRLNKPFLDYGDTVMYGLECSPS 128

  Fly   129 -WINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHYIERYN---------------- 176
             ||.........:....||..|...|.||.||::.|||::    ||..|                
  Rat   129 TWIRNHSHWGRRIVDFFLVVTQLGFCCVYFVFLADNFKQV----IEAANGTTTNCNNNETVILTP 189

  Fly   177 ---ERYYVLVACLLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMYYLFNGLPNINDREMVTPP 238
               .|.|:|.....|:.|..||.|:.|...:|::|..::....:|..::...:|:.:...:|.|.
  Rat   190 TMDSRLYMLTFLPFLVLLSFIRNLRILSIFSLLANISMFVSLIMIYQFIVQRIPDPSHLPLVAPW 254

  Fly   239 VEWIEFIAIAAFSLTAVGSMLVVEAHMAHPQSY-LGLF-GVLNLAVLFILLSNMFFGIIGYWRFG 301
            ..:..|...|.|:...:|.:|.:|..|...|.: |.|: |:..:.||:|.|     |.:||.:||
  Rat   255 KTYPLFFGTAIFAFEGIGVVLPLENKMKDSQKFPLILYLGMAIITVLYISL-----GSLGYLQFG 314

  Fly   302 DNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYENSEPRGRYRTLIEYVV 366
            .::..|||||:| :..|.|.:|:..:.|||.:|.|..:|...::.....:..|. |:..:::...
  Rat   315 ADIKGSITLNLP-NCWLYQSVKLLYSIGIFFTYALQFYVAAEIIIPAIVSRVPE-RFELVVDLSA 377

  Fly   367 RLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNVGYGRLMWKLIRDILLI 431
            |...:.:|..:|:.:|.|..:..|.|:.|.|.|.|:.|.|::|...|..|...|  .:.:|.|:.
  Rat   378 RTAMVCVTCVLAVLIPRLDLVISLVGSVSSSALALIIPPLLEVTTYYGEGISPL--TITKDALIS 440

  Fly   432 LIGLIFGIVGCTVALMQLIR 451
            ::|.:..:||...:|.:||:
  Rat   441 ILGFVGFVVGTYESLWELIQ 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 103/378 (27%)
Slc36a1NP_569099.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 5/29 (17%)
SLC5-6-like_sbd 47..452 CDD:382020 114/417 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352566
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

Return to query results.
Submit another query.