DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polyph and slc38a11

DIOPT Version :9

Sequence 1:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_017952819.1 Gene:slc38a11 / 100487061 XenbaseID:XB-GENE-6045807 Length:391 Species:Xenopus tropicalis


Alignment Length:421 Identity:88/421 - (20%)
Similarity:164/421 - (38%) Gaps:105/421 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RCSGFVMGTVMSILLMILLTYSIHLLIADMTECCRRRRVPQVSMPEAVRIAYEEGPKWINCFGRA 136
            |.:||.:|.::.|.:..:..||:.|||..                                 |..
 Frog     2 RLAGFPLGLLLLIGVAYVTDYSMILLIKG---------------------------------GSM 33

  Fly   137 AGFMTTCVLVF------GQFLLCTVYLVF-----VSKNF--KEIGDHYIER---------YNERY 179
            :|..|...||.      |.|||..:..::     :|.|.  .:|....|:|         |.:|:
 Frog    34 SGTNTYQSLVSKTFGFPGYFLLSVLQFLYPFAAMISYNIVTGDILPKIIQRIPGVSHDSWYVDRH 98

  Fly   180 YVLV--ACLLLLPLFMIRRLKYLVPLNLISNFLLYAGFALIMY---YLFNGLPNINDREMVTPPV 239
            .|:|  ..::.||:.:.|.::.|..::|:|..|.:....:|:.   .|.:.:|:..|        
 Frog    99 VVIVLSTAVITLPIALYRNMEKLGKVSLLSLLLTFTVLVIIIVRATSLTSEIPHTED-------- 155

  Fly   240 EWIEFIAIAAFSLTAVGSMLVVEAHMAHPQSYLGLFG------------VLNLAVLFILLSNMFF 292
            .| :|....|  :.|||.|..|  .|.|...:| ::|            :.::::|..|..::.:
 Frog   156 AW-DFARSNA--MQAVGVMSFV--FMCHHACFL-IYGSLEKATVGNWSRITHVSMLLSLFISLQY 214

  Fly   293 GIIGYWRFGDNVHASITLNIPQDEILSQFIKVFIASGIFLSYPLNGFV---VITVMFSDYENSEP 354
            .:.||..|.......:..|..:::.|:...:...|..|.|:||:..||   ||:.:|..      
 Frog   215 SVFGYVSFTGFTQGDLFENYCREDNLATIGRFCYAITIILTYPMECFVAREVISNVFFG------ 273

  Fly   355 RGRYRTLIEYVVRLLFLFLTGAVAIGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNVGYGR 419
             |.....:...|.:..:.||.||::....|....||.|..|.:.|..:.|..  .:|..:    .
 Frog   274 -GNLPYPLHLAVTVAIVSLTTAVSLVYDCLGMFLELNGVLSATPLVFIIPPA--CYLKQS----E 331

  Fly   420 LMWKLIRD---ILLILIGLIFGIVGCTVALM 447
            ..|..:.:   :|::|:|::....|..:|::
 Frog   332 KPWYHLDNAMPLLILLLGVVIMPAGFIMAIL 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 81/376 (22%)
slc38a11XP_017952819.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.