Protein Alignment Polr2E and NRPE5

DIOPT Version :10

• Sequence 1: NP_610630.1
• Gene: Polr2E / 36160
• FlyBaseID: FBgn0033571
• Length: 210
• Species: Drosophila melanogaster
• Sequence 2: NP_191267.1
• Gene: NRPE5 / 824875
• AraportID: AT3G57080
• Length: 222
• Species: Arabidopsis thaliana
• Alignment Length: 211
• Identity: 65/211 - (30%)
• Similarity: 116/211 - (54%)
• Gaps: 20/211 - (9%)

  Fly     6 ETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLVAHNDDPTD 70
            |:::.:..|:..:|:..||||.|:.::::.:|..|:.::|::|...|     |.:...|..|.|.
plant    24 ESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYGERPDVDR-----LRISALHRSDSTK 83

  Fly    71 QM-FVFFPEEPKIGIKTIKTYCTR------MQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILE 128
            :: .|||      |...:|....|      :.:|.|...|:|:|..:|..|.:::...:.|  :|
plant    84 KVKIVFF------GTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFSFK--VE 140

  Fly   129 QFLESELLINITEHELVPEHVVMTVEEKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKI 193
            .|..::||:|||:|.|.|:|.|:..|||..||.::.::|..|.||...|.:.||:||::|||||:
plant   141 IFQITDLLVNITKHSLKPQHQVLNDEEKTTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKV 205

  Fly   194 IRSSETAGRYISYRLV 209
            ....|....::::|.|
plant   206 NYRGELTESHVAFRCV 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2E	NP_610630.1	PLN03111	1..210	CDD:215582	65/211 (31%)
NRPE5	NP_191267.1	PLN03111	18..222	CDD:215582	65/211 (31%)