Sequence 1: | NP_001260878.1 | Gene: | Rpb5 / 36160 | FlyBaseID: | FBgn0033571 | Length: | 210 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_181665.1 | Gene: | RPB5D / 818732 | AraportID: | AT2G41340 | Length: | 218 | Species: | Arabidopsis thaliana |
Alignment Length: | 211 | Identity: | 65/211 - (30%) |
---|---|---|---|
Similarity: | 121/211 - (57%) | Gaps: | 20/211 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLVA-HNDDPT 69
Fly 70 DQMFVFFPEEPKIGIKTIKTYCTR------MQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILE 128
Fly 129 QFLESELLINITEHELVPEHVVMTVEEKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKI 193
Fly 194 IRSSETAGRYISYRLV 209 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rpb5 | NP_001260878.1 | PLN03111 | 1..210 | CDD:215582 | 65/211 (31%) |
RPB5D | NP_181665.1 | PLN03111 | 14..217 | CDD:215582 | 64/209 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2012 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54766 | |
OrthoDB | 1 | 1.010 | - | - | D1255823at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10535 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
7 | 6.890 |