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Protein Alignment Rpb5 and Polr2e
DIOPT Version :9
| Sequence 1: | NP_001260878.1 |
Gene: | Rpb5 / 36160 |
FlyBaseID: | FBgn0033571 |
Length: | 210 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_006241071.1 |
Gene: | Polr2e / 690966 |
RGDID: | 1589817 |
Length: | 242 |
Species: | Rattus norvegicus |
| Alignment Length: | 190 |
Identity: | 160/190 - (84%) |
| Similarity: | 173/190 - (91%) |
Gaps: | 0/190 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MDDEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLVAHN 65
||||.|||:||:||||||||.|||||||||||||||||:||..|||||||.||.|:||.||||||
Rat 1 MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHN 65
Fly 66 DDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILEQF 130
||||||||||||||||:||||||.||.|||||||.||::|||.|||||||||||||||||:||||
Rat 66 DDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYVLEQF 130
Fly 131 LESELLINITEHELVPEHVVMTVEEKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQV 190
|:.|||||||||||||||||||.||..|||:||||:|:.|.|||||||||||||:|||||
Rat 131 LQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVARYFGIKRGQV 190
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
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