Sequence 1: | NP_001260878.1 | Gene: | Rpb5 / 36160 | FlyBaseID: | FBgn0033571 | Length: | 210 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011526372.1 | Gene: | POLR2E / 5434 | HGNCID: | 9192 | Length: | 211 | Species: | Homo sapiens |
Alignment Length: | 210 | Identity: | 178/210 - (84%) |
---|---|---|---|
Similarity: | 190/210 - (90%) | Gaps: | 1/210 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDDEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLVAHN 65
Fly 66 DDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILEQF 130
Fly 131 LESELLINITEHELVPEHVVMTVEEKQELLSRY-KLKENMLMRIQAGDPVARYFGLKRGQVVKII 194
Fly 195 RSSETAGRYISYRLV 209 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rpb5 | NP_001260878.1 | PLN03111 | 1..210 | CDD:215582 | 178/210 (85%) |
POLR2E | XP_011526372.1 | PLN03111 | 1..210 | CDD:215582 | 176/208 (85%) |
RNA_pol_Rpb5_N | 4..92 | CDD:281816 | 73/87 (84%) | ||
RNA_pol_Rpb5_C | 138..210 | CDD:279524 | 60/71 (85%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165153169 | |
Domainoid | 1 | 1.000 | 161 | 1.000 | Domainoid score | I4039 |
eggNOG | 1 | 0.900 | - | - | E1_COG2012 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2018 | |
Inparanoid | 1 | 1.050 | 360 | 1.000 | Inparanoid score | I2212 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S297 |
OMA | 1 | 1.010 | - | - | QHG54766 | |
OrthoDB | 1 | 1.010 | - | - | D1255823at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003717 | |
OrthoInspector | 1 | 1.000 | - | - | oto90503 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101049 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10535 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1175 |
SonicParanoid | 1 | 1.000 | - | - | X3076 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.790 |