DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and ZNF3

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001305065.1 Gene:ZNF3 / 7551 HGNCID:13089 Length:453 Species:Homo sapiens


Alignment Length:283 Identity:81/283 - (28%)
Similarity:124/283 - (43%) Gaps:36/283 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 DRSE----------MQKHLIDHHKID-GDFEMYCYMQANCPACDRIFKDQRSARKHYTRVHTPVQ 410
            :|||          :..:||.|.::. ||      ....|..|.:.|.......:| .|:||   
Human   176 ERSEKYNDFGNSFTVNSNLISHQRLPVGD------RPHKCDECSKSFNRTSDLIQH-QRIHT--- 230

  Fly   411 IAVSPTESYACTACDKVFNQKASLHSHQRFCQVKDVVHCSFCDQQFNSMRKYELHLQQLHAVETV 475
                ..:.|.|..|.|.|:|.:.|..|||....:....||.|.:.|:......|| :::|..|..
Human   231 ----GEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSALILH-RRIHTGEKP 290

  Fly   476 HECEICRRSFKSAETLTMHRKRHS-ERHYQCGKCSLNYVNSAELRVHYERAHVNEEPVSCLTCGN 539
            :||..|.::|..:.|||.|::.|: |:.|.|.:|...:..|:.| :|::|.|..|:|..|..||.
Human   291 YECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTL-IHHQRIHTGEKPYECNECGK 354

  Fly   540 QFQNMTLLREHEQRSHQKSKVWRCEVCNFETKTRWRRRQHQYEHM-DYPYKCQKCTSEFADRSKF 603
            .|...:.|.:| ||.|...|.:.|..|..:........|||..|. :.||:|.:|...|...|..
Human   355 AFSQSSHLYQH-QRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSAL 418

  Fly   604 RQH------SKKVHGIELSDEQL 620
            .:|      .|.::||.:|...|
Human   419 VRHQRIHTGEKPLNGIGMSKSSL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262
C2H2 Zn finger 385..406 CDD:275368 5/20 (25%)
C2H2 Zn finger 421..470 CDD:275368 15/48 (31%)
C2H2 Zn finger 449..466 CDD:275371 5/16 (31%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 505..526 CDD:275368 6/20 (30%)
C2H2 Zn finger 534..555 CDD:275368 8/20 (40%)
ZNF3NP_001305065.1 KRAB 57..98 CDD:460171
COG5048 <182..360 CDD:227381 54/193 (28%)
C2H2 Zn finger 185..201 CDD:275368 3/15 (20%)
C2H2 Zn finger 209..229 CDD:275368 5/20 (25%)
C2H2 Zn finger 237..257 CDD:275368 9/19 (47%)
C2H2 Zn finger 265..285 CDD:275368 6/20 (30%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
C2H2 Zn finger 321..341 CDD:275368 6/20 (30%)
C2H2 Zn finger 349..369 CDD:275368 8/20 (40%)
zf-H2C2_2 361..386 CDD:463886 8/25 (32%)
C2H2 Zn finger 377..397 CDD:275368 5/19 (26%)
zf-H2C2_2 390..414 CDD:463886 9/23 (39%)
C2H2 Zn finger 405..425 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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