DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and ZNF878

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:XP_016882684.1 Gene:ZNF878 / 729747 HGNCID:37246 Length:567 Species:Homo sapiens


Alignment Length:538 Identity:112/538 - (20%)
Similarity:202/538 - (37%) Gaps:122/538 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 ITPGESVMVVSVAEKAVEN--------NNNY----------NFNNKNGDVTDEECDLIQRALEMT 256
            :.|.:..:...|.::.:.|        ||.|          |.....|:...|..:..|....:|
Human    57 LDPSQKNLYREVMQETLRNLTSIGKKWNNQYIEDEHQNPRRNLRRLIGERLSESKESHQHGEVLT 121

  Fly   257 -LNDDGCSQSPKNEASNETQLKSN-GIEVSS-PLFIKLATTSST--------TGNIPILKCNICQ 310
             :.||...:......|.|:.:... ||.:|| ...::..:.||:        ||..| .:|..|.
Human   122 QVPDDTLKKKTPGVQSYESSVCGEIGIGLSSLNRHLRAFSYSSSLAIHGRTHTGEKP-YECKECG 185

  Fly   311 YTHTDAEQLKIHYKSIHKISMMEDDIIGLNKNQNFKCRPCNS--------------------YET 355
            ........::.| :.||            :..:.::|:.|..                    ||.
Human   186 KAFRFPSSVRRH-ERIH------------SAKKPYECKQCGKAFSFPSSVRRHERIHSAKKPYEC 237

  Fly   356 KDRSEMQKHLIDHHKIDGDFEMYCYMQA-----NCPACDRIFKDQRSARKHYTRVHTPVQIAVSP 415
            |...:...:|:       .|:.:..|..     .|..|.:.|....|.::| .:.||       .
Human   238 KQCGKALSYLV-------SFQTHMRMHTGERPHKCNICGKAFFSPSSLKRH-EKSHT-------G 287

  Fly   416 TESYACTACDKVFNQKASLHSHQRFCQVKDVVHCSFCDQQFNSMRKYELHLQQLHAVETVHECEI 480
            .:.|.|..|||.||..:|...|:|....:....|:.|.:.|.|::...:| ::.|..|..:||::
Human   288 EKRYKCKQCDKAFNCPSSFQYHERTHSGEKPYECTQCRKAFRSVKYLRVH-ERKHTGEKPYECKL 351

  Fly   481 CRRSFKSAETLTMHRKRHS-ERHYQCGKCSLNYVNSAELRVH----------------------- 521
            |.:.|.|:.:...|.|.|: |:.|:|.||...:....:||:|                       
Human   352 CGKGFISSTSFRYHEKTHTGEKPYECKKCVKAFSFVKDLRIHERTHTGEKPFECKQCGKTFTSSN 416

  Fly   522 ----YERAHVNEEPVSCLTCGNQFQNMTLLREHEQRSHQKSKVWRCEVCNFETKTRWRRRQHQYE 582
                :||.|..|:|..|..||..|::.::|::| .|:|...|.:.|:.|....:...:.:.|:..
Human   417 SFHYHERTHTGEKPYECKQCGKAFRSASVLQKH-IRTHTGEKPYGCKQCGKVFRVASQLKMHERT 480

  Fly   583 HM-DYPYKCQKCTSEFADRSKFRQHSKKVHGIE--LSDEQLAEMFREKKGYTNRHDAFNKSINSL 644
            |. :.||:|::|...|...:..|.| |:.|..|  ...:|..:.|.....:     .:::.|::.
Human   481 HTGEKPYECKQCGKAFISSNSIRYH-KRTHTGEKPYKCKQCGKAFISSNSF-----LYHERIHTG 539

  Fly   645 EIPGLTEDCFTELESLGV 662
            |.|...:.|.....|..:
Human   540 EKPYECKQCGKAFRSASI 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262
C2H2 Zn finger 385..406 CDD:275368 5/20 (25%)
C2H2 Zn finger 421..470 CDD:275368 14/48 (29%)
C2H2 Zn finger 449..466 CDD:275371 4/16 (25%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 505..526 CDD:275368 8/47 (17%)
C2H2 Zn finger 534..555 CDD:275368 7/20 (35%)
ZNF878XP_016882684.1 KRAB 39..80 CDD:460171 3/22 (14%)
COG5048 158..557 CDD:227381 93/435 (21%)
C2H2 Zn finger 181..201 CDD:275368 3/20 (15%)
C2H2 Zn finger 209..229 CDD:275368 2/19 (11%)
C2H2 Zn finger 237..257 CDD:275368 3/26 (12%)
C2H2 Zn finger 265..285 CDD:275368 5/20 (25%)
C2H2 Zn finger 293..313 CDD:275368 9/19 (47%)
C2H2 Zn finger 321..341 CDD:275368 5/20 (25%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
C2H2 Zn finger 405..425 CDD:275368 2/19 (11%)
C2H2 Zn finger 433..453 CDD:275368 7/20 (35%)
C2H2 Zn finger 461..481 CDD:275368 3/19 (16%)
C2H2 Zn finger 489..509 CDD:275368 6/20 (30%)
C2H2 Zn finger 517..537 CDD:275368 2/24 (8%)
C2H2 Zn finger 545..565 CDD:275368 2/13 (15%)
Blue background indicates that the domain is not in the aligned region.

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