DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12942 and ZNF250

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_066405.1 Gene:ZNF250 / 58500 HGNCID:13044 Length:560 Species:Homo sapiens


Alignment Length:601 Identity:136/601 - (22%)
Similarity:222/601 - (36%) Gaps:114/601 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 LPSPTG----ELKRKASNETIPWNQFSQEFEQFVEGYEGPIEENVLYMRGTKVPRLDVDASSS-- 166
            ||.|.|    ..:.|.:.|.:.......|:::......| :..||:......|..|.:..|..  
Human     7 LPVPAGPQPLSFQAKLTFEDVAVLLSQDEWDRLCPAQRG-LYRNVMMETYGNVVSLGLPGSKPDI 70

  Fly   167 -SETAPKEDEVIL----------------FDVKYDTN-------------DLEEEDENDGSDAKN 201
             |:....||..:|                .::|||..             :.|.:.|:..:|...
Human    71 ISQLERGEDPWVLDRKGAKKSQGLWSDYSDNLKYDHTTACTQQDSLSCPWECETKGESQNTDLSP 135

  Fly   202 NETFFENSITPGESVMVVSVAEKAVENNNN---YNFNNKNGDVTDEECDLIQRALEMTLND---D 260
            .....|.::..|::.:      ..::..||   .:|......|...|..::.:::.:|.:.   .
Human   136 KPLISEQTVILGKTPL------GRIDQENNETKQSFCLSPNSVDHREVQVLSQSMPLTPHQAVPS 194

  Fly   261 G-----CSQSPKNEASNETQLKSNGIEVSSPLFI-----KLATTSST--------TGNIPILKCN 307
            |     |.:..|....:...|:...|......::     |..:.||.        ||..| .:||
Human   195 GERPYMCVECGKCFGRSSHLLQHQRIHTGEKPYVCSVCGKAFSQSSVLSKHRRIHTGEKP-YECN 258

  Fly   308 ICQYTHTDAEQLKIHYKSIHKISMMEDDIIGLNKNQNFKCRPCNSYETKDRSEMQKHLIDHHKID 372
            .|......:..|..|:| ||         .|...::..:||       |..::: .|||.|.:|.
Human   259 ECGKAFRVSSDLAQHHK-IH---------TGEKPHECLECR-------KAFTQL-SHLIQHQRIH 305

  Fly   373 GDFEMYCYMQANCPACDRIFKDQRSARKHYTRVHTPVQIAVSPTESYACTACDKVFNQKASLHSH 437
            .....|.     ||.|.:.|......|.| .||||       ..:.:.|..|.|.|:.|.:|..|
Human   306 TGERPYV-----CPLCGKAFNHSTVLRSH-QRVHT-------GEKPHRCNECGKTFSVKRTLLQH 357

  Fly   438 QRFCQVKDVVHCSFCDQQFNSMRKYELHLQQLHAVETVHECEICRRSFKSAETLTMHRKRHS-ER 501
            ||....:....||.|.:.| |.|...:....:|..|..:||..|.::|....||..|.:.|: |:
Human   358 QRIHTGEKPYTCSECGKAF-SDRSVLIQHHNVHTGEKPYECSECGKTFSHRSTLMNHERIHTEEK 421

  Fly   502 HYQCGKCSLNYVNSAELRVHYERAHVNEEPVSCLTCGNQFQNMTLLREHEQRSHQKSKVWRCEVC 566
            .|.|.:|...:|..:.| :.::|.|..|:|..|..||:.|.....|.:|| |.|...|.::|..|
Human   422 PYACYECGKAFVQHSHL-IQHQRVHTGEKPYVCGECGHAFSARRSLIQHE-RIHTGEKPFQCTEC 484

  Fly   567 N--FETKTRW--RRRQHQYEHMDYPYKCQKCTSEFADRSKFRQHSKKVHGIELSDE--QLAEMFR 625
            .  |..|...  ..|.|..|.   ||:|..|...|:..|...|| :::|..|...|  :....|.
Human   485 GKAFSLKATLIVHLRTHTGEK---PYECNSCGKAFSQYSVLIQH-QRIHTGEKPYECGECGRAFN 545

  Fly   626 EKKGYTNRHDAFNKSI 641
            : .|:..:|...::.:
Human   546 Q-HGHLIQHQKVHRKL 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262
C2H2 Zn finger 385..406 CDD:275368 7/20 (35%)
C2H2 Zn finger 421..470 CDD:275368 15/48 (31%)
C2H2 Zn finger 449..466 CDD:275371 6/16 (38%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 505..526 CDD:275368 5/20 (25%)
C2H2 Zn finger 534..555 CDD:275368 8/20 (40%)
ZNF250NP_066405.1 KRAB 22..82 CDD:214630 11/60 (18%)
COG5048 178..537 CDD:227381 102/397 (26%)
C2H2 Zn finger 201..221 CDD:275368 3/19 (16%)
C2H2 Zn finger 229..249 CDD:275368 3/19 (16%)
C2H2 Zn finger 257..277 CDD:275368 6/20 (30%)
C2H2 Zn finger 285..305 CDD:275368 7/27 (26%)
C2H2 Zn finger 313..333 CDD:275368 7/20 (35%)
C2H2 Zn finger 341..361 CDD:275368 9/19 (47%)
C2H2 Zn finger 369..389 CDD:275368 6/20 (30%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
C2H2 Zn finger 425..445 CDD:275368 5/20 (25%)
C2H2 Zn finger 453..473 CDD:275368 8/20 (40%)
C2H2 Zn finger 481..501 CDD:275368 5/19 (26%)
C2H2 Zn finger 509..529 CDD:275368 6/20 (30%)
C2H2 Zn finger 537..557 CDD:275368 3/20 (15%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.