DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and znf420

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001016394.1 Gene:znf420 / 549148 XenbaseID:XB-GENE-5724906 Length:410 Species:Xenopus tropicalis


Alignment Length:455 Identity:120/455 - (26%)
Similarity:183/455 - (40%) Gaps:120/455 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 DLIQRALEMTLNDDGCSQSPKNEASNETQLKSNGIEVS---------SPLFIKLATTSSTTGNIP 302
            ||....::.:.||:..|:     |::||   |||..||         ||    ..|.|...||:|
 Frog     7 DLPSLEMKESHNDEDNSR-----AASET---SNGQPVSSRNSSEGSNSP----AETGSEAEGNLP 59

  Fly   303 ILKCNICQYTHTDAEQLKIHYKSIHKISMMEDD---IIGLNKNQN--------FKCRPCNS--YE 354
                  .|..:||:|.|:..       .:.:||   :.|..|..:        :.|..|..  |.
 Frog    60 ------GQSENTDSELLETP-------DLFDDDDESVTGETKKNDICKKVLAKYMCMVCGKMFYR 111

  Fly   355 TKDRSEMQKHLIDHHKIDGDFEMYCYMQANCPACDRIFKDQRSARKHYTRVHTPVQIAVSPTESY 419
            ..|.:..|:    .|..:..:        :|..|.:.|....|..:| .|||:.|       :.:
 Frog   112 KPDYTVHQR----THTGERPY--------SCTVCGKRFTQSSSLARH-LRVHSEV-------KPF 156

  Fly   420 ACTACDKVFNQKASLHSHQR----------------FCQVKDVV------------HCSFCDQQF 456
            .||.|.|.|:|.:.|.:|||                |....::|            ||..|.:.|
 Frog   157 MCTDCGKSFSQNSHLVTHQRIHTGERPYSCNECGKSFSGSSNLVKHKKVHAGEKSWHCPGCGKSF 221

  Fly   457 NSMRKYELHLQQLHAVETVHECEICRRSFKSAETLTMHRKRHS-ERHYQCGKCSLNYVNSAELRV 520
            ....:...|| ::|..|..:.||||.:.|.|:..|..|::.|: ||.|.|.:|...:..|:.|.|
 Frog   222 TCSSQLRTHL-RVHTNEKPYACEICGKCFSSSSNLVTHQRVHTGERPYSCTECGKRFTQSSSLVV 285

  Fly   521 HYERAHVNEEPVSCLTCGNQFQNMTLLREHEQRSHQKSKVWRCEVC--NFETKTRWRRRQHQYEH 583
            |: |.|..|:..:|..||..|.:.:||.:| |::|.:.:.:.|..|  .|...:...|  ||..|
 Frog   286 HW-RVHTVEKLFTCSDCGKSFSHNSLLIKH-QKTHTEERPYVCMECGKGFTGSSALVR--HQRVH 346

  Fly   584 M-DYPYKCQKCTSEFADRSKFRQHSKKVHGIELSDEQLAEMFREKKGY--TNRHDAFNKSINSLE 645
            . :.||.|.:|...|.|:|...:|| :||.             |.|.|  .:..:.||...|.||
 Frog   347 TEERPYTCSECGKRFKDKSSLVRHS-RVHS-------------EDKPYACASCGETFNDGSNLLE 397

  Fly   646  645
             Frog   398  397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262
C2H2 Zn finger 385..406 CDD:275368 6/20 (30%)
C2H2 Zn finger 421..470 CDD:275368 18/76 (24%)
C2H2 Zn finger 449..466 CDD:275371 3/16 (19%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 505..526 CDD:275368 7/20 (35%)
C2H2 Zn finger 534..555 CDD:275368 8/20 (40%)
znf420NP_001016394.1 C2H2 Zn finger 102..122 CDD:275368 5/23 (22%)
zf-H2C2_2 118..139 CDD:463886 5/32 (16%)
C2H2 Zn finger 130..150 CDD:275368 6/20 (30%)
COG5048 <141..386 CDD:227381 77/271 (28%)
C2H2 Zn finger 158..178 CDD:275368 10/19 (53%)
C2H2 Zn finger 186..206 CDD:275368 2/19 (11%)
C2H2 Zn finger 214..234 CDD:275368 5/20 (25%)
C2H2 Zn finger 242..262 CDD:275368 8/19 (42%)
C2H2 Zn finger 270..290 CDD:275368 7/20 (35%)
C2H2 Zn finger 298..318 CDD:275368 8/20 (40%)
C2H2 Zn finger 326..346 CDD:275368 6/21 (29%)
C2H2 Zn finger 354..374 CDD:275368 7/20 (35%)
C2H2 Zn finger 382..402 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

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