DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and CG4360

DIOPT Version :9

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 22..101 CDD:285071
C2H2 Zn finger 385..406 CDD:275368
C2H2 Zn finger 421..470 CDD:275368
C2H2 Zn finger 449..466 CDD:275371
C2H2 Zn finger 478..498 CDD:275368
C2H2 Zn finger 505..526 CDD:275368
C2H2 Zn finger 534..555 CDD:275368
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368
zf-H2C2_2 157..181 CDD:290200
C2H2 Zn finger 172..192 CDD:275368
zf-H2C2_2 185..209 CDD:290200
C2H2 Zn finger 200..220 CDD:275368
C2H2 Zn finger 284..304 CDD:275368
zf-C2H2_8 287..363 CDD:292531
C2H2 Zn finger 312..332 CDD:275368
C2H2 Zn finger 340..360 CDD:275368
C2H2 Zn finger 478..498 CDD:275368
zf-H2C2_2 491..515 CDD:290200
C2H2 Zn finger 506..526 CDD:275368
zf-H2C2_2 519..543 CDD:290200
C2H2 Zn finger 534..554 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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