DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and CG6791

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster


Alignment Length:67 Identity:14/67 - (20%)
Similarity:28/67 - (41%) Gaps:15/67 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 CIDLNAHLRKFTKGEL---ILHASAC-------VEVLLSAFLTILFTDPIWQLRINSCGVQKVSD 124
            |:..|....::. ||:   :|.|:.|       |.::....|    ...||:..:...|::|:.:
  Fly   325 CVKYNVTATQYI-GEICRYLLAANPCPEEKQHNVRLMWGNGL----RGQIWKEFVGRFGIKKIGE 384

  Fly   125 WY 126
            .|
  Fly   385 LY 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262 8/39 (21%)
C2H2 Zn finger 385..406 CDD:275368
C2H2 Zn finger 421..470 CDD:275368
C2H2 Zn finger 449..466 CDD:275371
C2H2 Zn finger 478..498 CDD:275368
C2H2 Zn finger 505..526 CDD:275368
C2H2 Zn finger 534..555 CDD:275368
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368
C2H2 Zn finger 208..230 CDD:275368
C2H2 Zn finger 235..256 CDD:275368
C2H2 Zn finger 516..532 CDD:275368
C2H2 Zn finger 557..580 CDD:275368
C2H2 Zn finger 589..609 CDD:275368
COG5236 <939..>1096 CDD:227561
Blue background indicates that the domain is not in the aligned region.

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