DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and pzg

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_649297.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster


Alignment Length:547 Identity:118/547 - (21%)
Similarity:199/547 - (36%) Gaps:141/547 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 NNETFFENSITP--GESVMVVSVAEKAV----ENNNNYNFNNKNGDVTDEECDLIQRA-LEMTLN 258
            :..|.|.|.:..  ||..:|:...|..|    .|..|| ::....||...:.:||... .:..:|
  Fly   103 HTSTKFPNKLAQLVGEGFLVIVCGEDYVCSRCTNLVNY-YDRLENDVERVKTNLISLLNKKYAIN 166

  Fly   259 DD-GCSQSPK-------NEASNETQLKSNGIEVSSPLFI---------KLA---TTSSTTGN--- 300
            :| |...||.       ..::|.:..:|...::..|..:         |:|   |.||..|.   
  Fly   167 EDMGQEGSPPLKMQKMVGGSANRSLEESPSADLLRPRKLLQGNPVGQSKIAPGTTQSSVQGTQTV 231

  Fly   301 ----IPILKCNICQYTHTDAEQLKIHYKSIHKISMMEDDIIGLNKNQNFKCRPCNSYETKDRSEM 361
                ..|.||..|.|..:|......||::.              |.|.|:|:.|... ......|
  Fly   232 QRKATKIYKCTSCDYKTSDMRLFNTHYETC--------------KQQTFQCKTCRKI-FPHFGAM 281

  Fly   362 QKHLI-DHHKIDGDFEMYCYMQANCPACDRIFKDQRSARKHYTRVH---------TPVQIAVSPT 416
            ::|:: ||:..         |...|..|...|.::.|.|||....|         |.:..:.:|.
  Fly   282 KQHMVRDHNTA---------MDNTCAMCHINFVNENSLRKHMETNHATNVLVTSTTTIPASAAPV 337

  Fly   417 ESYACTACDKVFNQK---ASLHSHQRFCQVKDVVHCSFCDQQFNSMRK--YELHLQQLHAV--ET 474
            .: |..|.....|:.   .||::            |:.|  ||.|..|  ::.|::: ||.  ..
  Fly   338 AA-AAAAAAAAANENLVGTSLYT------------CNHC--QFKSTDKVVFDEHMRK-HAAGKPK 386

  Fly   475 VHECEICRRSFKSAETLTMHRKRHSERHYQCGKCSLNYVNSAELRVHYERAHVNEEPVSCLTCGN 539
            ..:|.:|.:.|::.|..|:|.|:|....::||.||:.:.....|..|:|   |::.|.:......
  Fly   387 PFKCRLCSQRFETREAATVHAKQHQTNFFKCGTCSMTFPKREMLVKHFE---VHQSPSASTVSPK 448

  Fly   540 Q--FQNMT---LLRE--HEQRSHQKSKVWRCEVCNFETKTRWRRRQHQYEHMDYPYKCQKCTSEF 597
            |  .||:.   ||:|  .|..|..........|...|::...|.           :.|..|:..|
  Fly   449 QSVSQNLNTQKLLQETIDEALSDSLPASTAAVVATTESENNIRF-----------FSCSICSLTF 502

  Fly   598 ADRSKFRQHSKKVHGIELSDEQLAEMFREKKGYTNRHDAFNKSINSL--EIPGLT---------- 650
            ...:.:..| .:.|.            |:||..:....|.|.:..:|  :.||..          
  Fly   503 IQETYYNHH-METHR------------RDKKATSAGATALNSAATALLSDEPGEATGKAGDESGE 554

  Fly   651 EDCFTELESLGVDYDAITTDLFASSAA 677
            ::...::|||   ::.:.:|...|..|
  Fly   555 QNAEADIESL---FEKLHSDKNESGEA 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262
C2H2 Zn finger 385..406 CDD:275368 7/20 (35%)
C2H2 Zn finger 421..470 CDD:275368 11/53 (21%)
C2H2 Zn finger 449..466 CDD:275371 6/18 (33%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 505..526 CDD:275368 7/20 (35%)
C2H2 Zn finger 534..555 CDD:275368 7/27 (26%)
pzgNP_649297.1 C2H2 Zn finger 241..263 CDD:275371 6/35 (17%)
C2H2 Zn finger 268..289 CDD:275371 4/21 (19%)
C2H2 Zn finger 297..318 CDD:275371 7/20 (35%)
C2H2 Zn finger 360..380 CDD:275368 7/22 (32%)
zf-H2C2_2 373..399 CDD:463886 6/26 (23%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 417..437 CDD:275368 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

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